Gene Sfum_3427 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3427 
Symbol 
ID4458263 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4190276 
End bp4190818 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content57% 
IMG OID639704198 
Producthypothetical protein 
Protein accessionYP_847534 
Protein GI116750847 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00012558 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCGACG CACAGGTGAA CGCAGAGCGA ACCCCCGCCC CGGAACTGCG CAAAAACTGG 
CGGTTTTATG CGGGGATGAC GTGTTTCGTG CTGGCCTGGA TTCTCCCGGC CTTCAGTCCT
CTGGTGATCT GGCTGCAGCT TCCGAAAGCT GTCACGGCCT TCGTCATCGG CGCCCTCCTG
GTCGGAGGAC CGGAAGTCTT CATGATCCTG GCGGTCCTTT TCTGGGGGCG GGAAACCCTC
AACCATTACA TGGCGAAGAT CCGTTCCCTC ATGAAGATCA GGATTCCTTC ACGGCCCGTA
TCGAGGCTTC GCTACTATCT CGGGCTGACC ATGATGATTG GAAGCGTTCT CCCGCTCTAC
CTCTACGGTT ATTTCCCCGG CGCGATGCCG ACGCAGGACA CGGTGAAAAT CAAGATCCTC
GCGGGGGCCG ACGTCCTGTT CATCGTGAGT TTCTTTGTCG CGGGGAGTGA ATTCTGGGAG
AAGTTCAAAC GGCTGTTCGT CTATGAAGGG CGATACGCGG GGGATGAGGA TCCTTCCAAA
TAA
 
Protein sequence
MSDAQVNAER TPAPELRKNW RFYAGMTCFV LAWILPAFSP LVIWLQLPKA VTAFVIGALL 
VGGPEVFMIL AVLFWGRETL NHYMAKIRSL MKIRIPSRPV SRLRYYLGLT MMIGSVLPLY
LYGYFPGAMP TQDTVKIKIL AGADVLFIVS FFVAGSEFWE KFKRLFVYEG RYAGDEDPSK