Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_3427 |
Symbol | |
ID | 4458263 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 4190276 |
End bp | 4190818 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639704198 |
Product | hypothetical protein |
Protein accession | YP_847534 |
Protein GI | 116750847 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.00012558 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAGCGACG CACAGGTGAA CGCAGAGCGA ACCCCCGCCC CGGAACTGCG CAAAAACTGG CGGTTTTATG CGGGGATGAC GTGTTTCGTG CTGGCCTGGA TTCTCCCGGC CTTCAGTCCT CTGGTGATCT GGCTGCAGCT TCCGAAAGCT GTCACGGCCT TCGTCATCGG CGCCCTCCTG GTCGGAGGAC CGGAAGTCTT CATGATCCTG GCGGTCCTTT TCTGGGGGCG GGAAACCCTC AACCATTACA TGGCGAAGAT CCGTTCCCTC ATGAAGATCA GGATTCCTTC ACGGCCCGTA TCGAGGCTTC GCTACTATCT CGGGCTGACC ATGATGATTG GAAGCGTTCT CCCGCTCTAC CTCTACGGTT ATTTCCCCGG CGCGATGCCG ACGCAGGACA CGGTGAAAAT CAAGATCCTC GCGGGGGCCG ACGTCCTGTT CATCGTGAGT TTCTTTGTCG CGGGGAGTGA ATTCTGGGAG AAGTTCAAAC GGCTGTTCGT CTATGAAGGG CGATACGCGG GGGATGAGGA TCCTTCCAAA TAA
|
Protein sequence | MSDAQVNAER TPAPELRKNW RFYAGMTCFV LAWILPAFSP LVIWLQLPKA VTAFVIGALL VGGPEVFMIL AVLFWGRETL NHYMAKIRSL MKIRIPSRPV SRLRYYLGLT MMIGSVLPLY LYGYFPGAMP TQDTVKIKIL AGADVLFIVS FFVAGSEFWE KFKRLFVYEG RYAGDEDPSK
|
| |