| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3423 |
|---|
| Symbol | |
|---|
| ID | 4458259 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | + |
|---|
| Start bp | 4188109 |
|---|
| End bp | 4188564 |
|---|
| Gene Length | 456 bp |
|---|
| Protein Length | 151 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639704194 |
|---|
| Product | MarR family transcriptional regulator |
|---|
| Protein accession | YP_847530 |
|---|
| Protein GI | 116750843 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1846] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 0.000118628 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACAACCG GAGATTTCGA CTTGCACCAC GCCGGGGATG AGCCGCATCT CATTCGTGAG
ATCATGCGCA CGCACCAGGC GGTGCTGAAC GTGTTCAGCC GCCGGGTGGG AATGCCGGCA
GCGCGGCTGG CGCTGATGCG ACTCCTTGGA ACTTGCCGCT CGGAGGCCGT CGGGGTCATG
TGGATCGCCC GGCAACTGGG CATCGATGCG GCGGCGGTCA CTCGCCAGGT GCAAGCCATG
GAAAGGGAGG GGCTGGTCGA GCGCTGCAAA GATGCCAGGG ATGGTCGACG CAGTCACGTC
AAATTGACGG ATGACGGGCT GAGGGCTTTC CTCCAGGTGC ACGAGCGGGC GCACGCTTTC
GAGCGGGCAC TCGGCGCCGA CGTATCCGCG GAAGACATGG CCGCAGCGGC ACGTGTCCTG
GTTCGCCTGC GTGCCGCTCT CGAAGCGTTG CCCTGA
|
|---|
| Protein sequence | MTTGDFDLHH AGDEPHLIRE IMRTHQAVLN VFSRRVGMPA ARLALMRLLG TCRSEAVGVM
WIARQLGIDA AAVTRQVQAM EREGLVERCK DARDGRRSHV KLTDDGLRAF LQVHERAHAF
ERALGADVSA EDMAAAARVL VRLRAALEAL P
|
|---|
| |