Gene Sfum_3413 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3413 
Symbol 
ID4458284 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4178347 
End bp4179111 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content63% 
IMG OID639704185 
Producthypothetical protein 
Protein accessionYP_847521 
Protein GI116750834 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.033243 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAACGTG CAACCCACAT CACGGCGACG ATACGAAAGC CAAACGACTG CCGGAGGACA 
GGAACAGTCC CGGGATGCAC GACTCCGATT CCCCGCCTTG ATCCCGCCGT CCAAGCCGCG
GCAAAACTTC TCGGACGGAA CATTGTGAGC CCTCCTCGGG AACATTTTGT ACCTTCAGCC
CACCTTTCGT TCGTTCCGGC GGGATGCGTA TTCCCGCAAC CCTCGTGTTG TTCTCTCCTC
CGGCATGAAT TTTGCCCCGG ACAGGGTCGG GTATCGGCTC AGAAACGGGC TACCGGAGCC
GGCGCGCTTC ACGGGCGCTT GCCCCCGCAA GGACGGTGTG CGCTCCTCGC ATTTCATGCA
ACCGGCTTCG ATCCGCTTCT GACGGAAACA ATCCTTTTGA ACCAGGGAGG AACGACCATG
CCGGGCAAAG ACAGAACCGG TCCGCAAGGA CTGGGCCCCA TGACGGGCAG GCAACTCGGT
TTTTGCAGTG GTGCAGTCGA GGGCGACGCA CTGGAGGGAT ACCACGGACC ATTCTTTGGT
CGGGGCCCGG GTCGCGGCCG AGGGTGGAGA CGATTCACCG CCGGGATGGC GGCTCCCGTC
CGGCCGTGCG CCGGAAGAGG CCGCTTCGAA GCCGCGGGCT ATACCCGGTC GGCTCCCCGG
GATGAACTCA ATGTCCTCAG GGACCACATC GCGCACCTTG AAGGGGCGCT TGACGCCGCC
AGGGCAAGGA TAGCCCAAAT CGAGAGGGAT CGGAACGCAG AGTGA
 
Protein sequence
MQRATHITAT IRKPNDCRRT GTVPGCTTPI PRLDPAVQAA AKLLGRNIVS PPREHFVPSA 
HLSFVPAGCV FPQPSCCSLL RHEFCPGQGR VSAQKRATGA GALHGRLPPQ GRCALLAFHA
TGFDPLLTET ILLNQGGTTM PGKDRTGPQG LGPMTGRQLG FCSGAVEGDA LEGYHGPFFG
RGPGRGRGWR RFTAGMAAPV RPCAGRGRFE AAGYTRSAPR DELNVLRDHI AHLEGALDAA
RARIAQIERD RNAE