| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3401 |
|---|
| Symbol | |
|---|
| ID | 4458272 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | - |
|---|
| Start bp | 4168954 |
|---|
| End bp | 4169907 |
|---|
| Gene Length | 954 bp |
|---|
| Protein Length | 317 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639704173 |
|---|
| Product | selenide, water dikinase |
|---|
| Protein accession | YP_847509 |
|---|
| Protein GI | 116750822 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0709] Selenophosphate synthase |
|---|
| TIGRFAM ID | [TIGR00476] selenium donor protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0323823 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGGAAG ACCCGAACCT GCTCGTGGGA CGCGAGACGT CCGACGATGC CGGCGTCTAC
CGCCTGACGG ACGAGCTTGC CCTGGTTCAG ACCATCGACT TCATCACCCC CGTCGTGAAC
GATCCTTACG ATTTCGGCCG GATCGCCGCG GCAAACGCCC TCAGTGACGT GTACGCCATG
GGGGGACGGC CGCTCACGGC CATGAACGTC GTTTGCTTCC CCGTGAAAAG CCTGGATAAA
GCCATCCTCA AAGAGATCCT TCGAGGAGGG CTGGAGAAGA CCCACGAAGC CGGGGCCGTC
CTCGCTGGAG GACACAGCGT GGAAGACCCG GAGATCAAGT ACGGTCTTTC GGTCACCGGC
ACGGTTCACC CCGACAGGAT CCTGACCAAT GCAGGGGTCC GCCCGGGGGA CGCCCTCATC
CTCACCAAAC CGCTCGGAAC GGGGATATTG GCCACCGCAA TAAAGGCGGA GCTGGTCTCT
GAAGAGGGAG AGAAGCTGGC CATCGAGACC ATGGCGACCC TCAACCGGAG GGCCGCCGAG
GTCATGGCCG CATACCCGGT GCATGCGTGC ACCGACGTCA CCGGCTTTGG CCTCCTGGGC
CACGCCCTGG AGATGGCGGC GGCGAGCAAC GTCTCGATCA CGATCGAGGC GGAAAGGGTT
CCCCTGCTTC CGGAGGCCCT GGATTTGCTG CAACTGGGAC TCCTGCCCGC GGGGAGCTAT
GCAAATCGCA GCTTTTGTGC CCATCGGGTC CTTCAGACCG AACCGCTGGA TCCCCTGCTA
CTGGACCTTC TCGCCGACGC ACAGACCTCG GGCGGACTGC TTATTTCGCT TCCCGAAGAA
GACGCCGACT CGCTGGTCGG GGCACTGAAA GCGGGAGGGG TTCCCCGCGC GGCGATCATC
GGCCGTGCAA CCAGGGCGGA CAAGGGATCG ATTCAATTGA TGCGCCGGGC GTGA
|
|---|
| Protein sequence | MEEDPNLLVG RETSDDAGVY RLTDELALVQ TIDFITPVVN DPYDFGRIAA ANALSDVYAM
GGRPLTAMNV VCFPVKSLDK AILKEILRGG LEKTHEAGAV LAGGHSVEDP EIKYGLSVTG
TVHPDRILTN AGVRPGDALI LTKPLGTGIL ATAIKAELVS EEGEKLAIET MATLNRRAAE
VMAAYPVHAC TDVTGFGLLG HALEMAAASN VSITIEAERV PLLPEALDLL QLGLLPAGSY
ANRSFCAHRV LQTEPLDPLL LDLLADAQTS GGLLISLPEE DADSLVGALK AGGVPRAAII
GRATRADKGS IQLMRRA
|
|---|
| |