Gene Sfum_3397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3397 
Symbol 
ID4458303 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4164205 
End bp4164954 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content63% 
IMG OID639704169 
ProductABC transporter related 
Protein accessionYP_847505 
Protein GI116750818 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0271922 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGGCAC TTGTGGAAGT TCGCAACGTC ACGAAAAGCT TCGGCGGGCT GGTCGCCAAC 
AAGAATATCT CCTTTGAAGC GGCCCGGGGG GAGTTGCTCG GCATCATCGG CCCCAACGGG
GCCGGGAAAA CCACGCTGTT CAACTCCGTT GCAGGCACTC ACCGCATCGA TTCGGGCCGG
ATCGTCTTCG ACGGCCGGGA CATCACGGCG CTGAAGGCCC ATGAGATCGC CCGGCTCGGC
CTCACCAGGA CCTTCCAGAT CTACGCCGCG TCCGGGGACC TCACCGTGAA GGAAAACATC
ATGGTGGGCT GTTTCATGAA GACCGGTTCA CGGTCCGTCG CCTCGGCCCG CGCGGATGGA
CTGCTGAGGG ACTTCCAGCT TGAGCCTCTG GCACGCCACA TGGTGGGAGA GCTTCCCATC
GCCGCCCAAA AGCGCGTGGT CATGGCCACG GCCATGGGTA CCGAGCCGAA GCTCCTGCTG
CTCGACGAGG TTGCCGCCGG CCTCACGCCG CACGAAGTGG ACGCCACCGT GGCGAGCATC
CGTTTCATCC ACCAGGACCT CGGGGTGACC GTGATTCTTA TCGAGCACGT TATGGAAATG
GTCATGAACG TCTGTCACCG GGTGCTCGTC CTGGATTACG GGGAGAAGAT CGCCGAAGGG
CTGCCCCGGG ACGTCGTCAA GGATCCGGGC GTCATCAAGG CATACCTGGG CGAACGCTAC
GCTCGAGAAT ACACGGCGGA GTCAAGCTGA
 
Protein sequence
MTALVEVRNV TKSFGGLVAN KNISFEAARG ELLGIIGPNG AGKTTLFNSV AGTHRIDSGR 
IVFDGRDITA LKAHEIARLG LTRTFQIYAA SGDLTVKENI MVGCFMKTGS RSVASARADG
LLRDFQLEPL ARHMVGELPI AAQKRVVMAT AMGTEPKLLL LDEVAAGLTP HEVDATVASI
RFIHQDLGVT VILIEHVMEM VMNVCHRVLV LDYGEKIAEG LPRDVVKDPG VIKAYLGERY
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