Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_3397 |
Symbol | |
ID | 4458303 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 4164205 |
End bp | 4164954 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639704169 |
Product | ABC transporter related |
Protein accession | YP_847505 |
Protein GI | 116750818 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0271922 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACGGCAC TTGTGGAAGT TCGCAACGTC ACGAAAAGCT TCGGCGGGCT GGTCGCCAAC AAGAATATCT CCTTTGAAGC GGCCCGGGGG GAGTTGCTCG GCATCATCGG CCCCAACGGG GCCGGGAAAA CCACGCTGTT CAACTCCGTT GCAGGCACTC ACCGCATCGA TTCGGGCCGG ATCGTCTTCG ACGGCCGGGA CATCACGGCG CTGAAGGCCC ATGAGATCGC CCGGCTCGGC CTCACCAGGA CCTTCCAGAT CTACGCCGCG TCCGGGGACC TCACCGTGAA GGAAAACATC ATGGTGGGCT GTTTCATGAA GACCGGTTCA CGGTCCGTCG CCTCGGCCCG CGCGGATGGA CTGCTGAGGG ACTTCCAGCT TGAGCCTCTG GCACGCCACA TGGTGGGAGA GCTTCCCATC GCCGCCCAAA AGCGCGTGGT CATGGCCACG GCCATGGGTA CCGAGCCGAA GCTCCTGCTG CTCGACGAGG TTGCCGCCGG CCTCACGCCG CACGAAGTGG ACGCCACCGT GGCGAGCATC CGTTTCATCC ACCAGGACCT CGGGGTGACC GTGATTCTTA TCGAGCACGT TATGGAAATG GTCATGAACG TCTGTCACCG GGTGCTCGTC CTGGATTACG GGGAGAAGAT CGCCGAAGGG CTGCCCCGGG ACGTCGTCAA GGATCCGGGC GTCATCAAGG CATACCTGGG CGAACGCTAC GCTCGAGAAT ACACGGCGGA GTCAAGCTGA
|
Protein sequence | MTALVEVRNV TKSFGGLVAN KNISFEAARG ELLGIIGPNG AGKTTLFNSV AGTHRIDSGR IVFDGRDITA LKAHEIARLG LTRTFQIYAA SGDLTVKENI MVGCFMKTGS RSVASARADG LLRDFQLEPL ARHMVGELPI AAQKRVVMAT AMGTEPKLLL LDEVAAGLTP HEVDATVASI RFIHQDLGVT VILIEHVMEM VMNVCHRVLV LDYGEKIAEG LPRDVVKDPG VIKAYLGERY AREYTAESS
|
| |