Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_3396 |
Symbol | |
ID | 4458302 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 4163489 |
End bp | 4164205 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639704168 |
Product | ABC transporter related |
Protein accession | YP_847504 |
Protein GI | 116750817 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0282544 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGAAC CGCTGTTGCA GGTCAAGGCG ATCAAGGTCC GTTATTCGGG ACTGCCCGTC ATCCACGGCG TTTCCCTGGA GGTGTATCCC GGGGAAACGG TTTGCGTGGT GGGCTCGAAC GGCGCCGGGA AATCGACCAT TTTGAGGGCG GTGATGGCGG CGCAGAGGGC CTTCGAGGGC GAAATCCGGT TCGGCGGCGT CGCGATCCAC GATAAGCGGA CCGAGGCCAT CGTTCGACTC GGCGTCGTTT ACGTCCCGGA GGAAAAGATG CTCTTTCGAC CGCTCTCCGT CGAGGAAAAC CTGCTCCTTG GCGCCTACTG CCTCGAGGAC CGGCAGCGCA TCGCGGAAAA CCTGGAATTC GTGTTCACAC TCTTTCCGCG CTTGCGGGAG CGGCGCCGGC AGGCCGCATC CACCCTCTCC GGAGGCGAAC AGCAGATGGT CGCGGTCGGC AGAGGACTCA TGTCGAACCC CAGGATCCTC ATGCTCGACG AGCCATCGCT GGGACTCTCG CCGTTGCTCG TGGACGAGCT CTTCGACGCG ATCGTGAAGC TCAAGAAGGA AGGTCTCACC ATTCTGCTCG TCGAACAGAA CGTGAGGGAA TCCCTCGAGA TGAGTGATCG GGGCTACGTC CTGCAGACGG GAAAGGTGGT GCAGGAAGGC TCAGGCGCCG AACTGCTGCA AGACGACAGC GTCCGGAAGG CGTTCCTGGG GTTGTGA
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Protein sequence | MPEPLLQVKA IKVRYSGLPV IHGVSLEVYP GETVCVVGSN GAGKSTILRA VMAAQRAFEG EIRFGGVAIH DKRTEAIVRL GVVYVPEEKM LFRPLSVEEN LLLGAYCLED RQRIAENLEF VFTLFPRLRE RRRQAASTLS GGEQQMVAVG RGLMSNPRIL MLDEPSLGLS PLLVDELFDA IVKLKKEGLT ILLVEQNVRE SLEMSDRGYV LQTGKVVQEG SGAELLQDDS VRKAFLGL
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