Gene Sfum_3393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3393 
Symbol 
ID4458299 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4161057 
End bp4161842 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content63% 
IMG OID639704165 
Producthypothetical protein 
Protein accessionYP_847501 
Protein GI116750814 
COG category[S] Function unknown 
COG ID[COG4336] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0256921 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGTA TGGAATCGCC ACGTGACATC AGGGCAAGAA TAGCCCGCAG CCAATGGACC 
AAGCCGACCA CCGGCCTGGC CCCCGCTTAC GCCCAGGCCA ATGTCGTTAT CCTCGACCGG
CGATACGCTT TCGACTTTCT CCTGTTCTGC GTCCGGAATT CCAAGCCCTG CCCGATCCTG
GAAGTCCTGG AACCCGGGGT GACCGAGCCG CATGCAACCG CTCCAGGAGC CGACATACGC
ACGGACGTAC CGCTCTATCG CGTTTGGAGG AAAGGCAGAC TGGAACAGGA GGCGACCGAC
ATCACGGGCT GTTTCGACGC AGGCATGGTC TCGTTTCTGC TCGGATGCAG CTTCACCTTC
GAAGCGTCCC TGACGGGCGC GGGGGTGCCG GTGAGAAACA TCGAGGAAGG CAAGAACGTC
TCCATGTACG TCACCAACCG CAAGTGCGCT TCGGCGGGAC CTTTTTCCGC CCCGCTCGTC
GTGACCATGC GCCCCATTCC CAACGACCTC GTCATGCGCG CCGTCCGGAT CACCTCCCGT
TACTCCCTGG CTCACGGCGC CCCGATCCAG GTGGGAGATC CCGGCGCCCT GGGAATTCGC
GATCTCGACC GGCCCGATTT CGGCGACCCC GTCACCGTCA AGGACGGAGA AACCCCCGTG
TTCTGGGCCT GCGGCGTGAC TTCGTCCCTG GCGGTCCTGT CCGCCGAGCC TGAGCTGTGC
ATCACGCATG CCCCCGGGCA TATGTTCATC ACGGACGTGC TCAACGAGAC ACTGGCAGCG
CTCTGA
 
Protein sequence
MTGMESPRDI RARIARSQWT KPTTGLAPAY AQANVVILDR RYAFDFLLFC VRNSKPCPIL 
EVLEPGVTEP HATAPGADIR TDVPLYRVWR KGRLEQEATD ITGCFDAGMV SFLLGCSFTF
EASLTGAGVP VRNIEEGKNV SMYVTNRKCA SAGPFSAPLV VTMRPIPNDL VMRAVRITSR
YSLAHGAPIQ VGDPGALGIR DLDRPDFGDP VTVKDGETPV FWACGVTSSL AVLSAEPELC
ITHAPGHMFI TDVLNETLAA L