Gene Sfum_3390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3390 
Symbol 
ID4458296 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4158561 
End bp4158908 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content57% 
IMG OID639704162 
ProductArsR family transcriptional regulator 
Protein accessionYP_847498 
Protein GI116750811 
COG category[K] Transcription 
COG ID[COG0640] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0577115 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGCGT TCATCCGGGT CATGAAAGCC TTGTCGGATC CCGGCCGGGT GAAAATCCTG 
AAAATGCTCG AACACAAGAG CATGTGTGTT TGCGAGATTC AGTCCGCTCT GAAACTGGCG
CAGCCGACCG TCTCCAAGCA TCTCAAAACG CTCGAGGACG CCGGCCTCGT GACCTGTCGA
AAGCAGGGAC TCTGGGTAAA CTATCACCTG AACGAAACTC GTGAAAACCC ATACGCCGCC
GCCCTGCTCG AAAATCTCGG GGATTGGCTG GGCGACGATC CCGAGGTGCG CGGGCTCCTG
GAACGGTTGC CCCATATCAG GCGGGAAGAC ATCTGCCGGA AATCCTGA
 
Protein sequence
MRAFIRVMKA LSDPGRVKIL KMLEHKSMCV CEIQSALKLA QPTVSKHLKT LEDAGLVTCR 
KQGLWVNYHL NETRENPYAA ALLENLGDWL GDDPEVRGLL ERLPHIRRED ICRKS