| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3387 |
|---|
| Symbol | |
|---|
| ID | 4458293 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | + |
|---|
| Start bp | 4156604 |
|---|
| End bp | 4157218 |
|---|
| Gene Length | 615 bp |
|---|
| Protein Length | 204 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639704159 |
|---|
| Product | TrpR binding protein WrbA |
|---|
| Protein accession | YP_847495 |
|---|
| Protein GI | 116750808 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0655] Multimeric flavodoxin WrbA |
|---|
| TIGRFAM ID | [TIGR01755] NAD(P)H:quinone oxidoreductase, type IV |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0637331 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGTGT TGATCGTGTT CTATTCGATG TACGGCCATA TCTATCGAAT GGCGGAAGCC
GTCGCGGAGG GGGTTCGCTC GGTTGATGGG GCGGAGGCGG TGTTGCGCCG CGTCCCGGAG
ACACTGTCGG CGGAAATCCT GGCGAGTATG GGGGCAACCG AGGCGCAGAA ACAATTTGCG
CACATTCCCG TGTGCACGGT CGACGAGCTC GGCGCCGCGG ATGCGGTCAT TTTCGGGACG
CCGACCCGTT TCGGAAACAT GGCCGGGCAG ATGCGCCAGT TCCTGGACGC CACCGGCCGG
CTTTGGGTGA GCGGGGCGTT GGTCGGGAAG GCGGGAAGCG TCTTCACAAG CTCCAACACT
CAGCACGGAG GCCAGGAATC GACGATCCTG TCTTTTCACA TCAATCTGCT CCACCAGGGC
ATGGTCATCG TCGGATTGCC GTATTCATTC CAGGGGCAGT CGACGATGGA CGAGATCACG
GGCGGATCAC CCTATGGCGC GTCGACGATC GCCGGTCCGA CGGGAGCCCG GACCCCCAGC
GACAACGAAC TGGCGGGGGC AAGGTATCAA GGCAGGCATG TCGCGGAAAT AGCTCGCAAG
CTGACGCGAA ACTAG
|
|---|
| Protein sequence | MKVLIVFYSM YGHIYRMAEA VAEGVRSVDG AEAVLRRVPE TLSAEILASM GATEAQKQFA
HIPVCTVDEL GAADAVIFGT PTRFGNMAGQ MRQFLDATGR LWVSGALVGK AGSVFTSSNT
QHGGQESTIL SFHINLLHQG MVIVGLPYSF QGQSTMDEIT GGSPYGASTI AGPTGARTPS
DNELAGARYQ GRHVAEIARK LTRN
|
|---|
| |