| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3382 |
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| Symbol | |
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| ID | 4458323 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 4151957 |
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| End bp | 4152610 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639704154 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_847490 |
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| Protein GI | 116750803 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.424816 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCACC AGGCAGTGAT CTTCGATGTG GACGGGACCC TCCTCGACAG CCTCGAGGAT
CTCGCCGATT CGATGGACAC GGTATTGCGG CAGAACAACT TCCCGGTCCA CAGCCTGGAT
CGATACAAGT ACTTTGTGGG CAATGGGATG GAAAATCTGG TCCGCAGAGC GCTTCCGGAA
GAGCGCCGCA GCGACGAGGC CCTCGTGGCG GAGTGTTTTG ATCGCATGCG CGAGGAATAC
GCGAACCGGT GGAACGCGAA GACCCGCCTC TACGAAGGGA TCCCCGAGCT TCTCGATGCA
CTTGCCGGAC TGAATGTCAG GATTTCCGTC CTCTCAAACA AACCCCACGA TTTCACCAGG
AAGGTCGTCG GAGAGCTGCT GGGCCGGTGG CGGTTCGACC ACGTGTTTGG AGAGAGGATG
TCCGTGCCGC GGAAGCCCGA CCCTGCCGCG GCTTTGGAAA TCGCCGGACT GAGCGGCATA
TCGCCCGGCA GGTTCCTCTA TCTGGGCGAC ACCGCAACCG ACATGCGGAC TGCAACGGCG
GCCGGCATGT TCGCGGTGGG AGCGCTCTGG GGATTCCGTA CGGCCGATGA GCTCCTGTCC
GCCGGCGCCA TGGCGCTCAT CAGGAATCCG CTCGAGCTGC TGCCCCTCCT TTGA
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| Protein sequence | MKHQAVIFDV DGTLLDSLED LADSMDTVLR QNNFPVHSLD RYKYFVGNGM ENLVRRALPE
ERRSDEALVA ECFDRMREEY ANRWNAKTRL YEGIPELLDA LAGLNVRISV LSNKPHDFTR
KVVGELLGRW RFDHVFGERM SVPRKPDPAA ALEIAGLSGI SPGRFLYLGD TATDMRTATA
AGMFAVGALW GFRTADELLS AGAMALIRNP LELLPLL
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