Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_3379 |
Symbol | |
ID | 4458320 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 4146678 |
End bp | 4147907 |
Gene Length | 1230 bp |
Protein Length | 409 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639704151 |
Product | RND family efflux transporter MFP subunit |
Protein accession | YP_847487 |
Protein GI | 116750800 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.189038 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAAGG CGCAGGAAGA CGAAAAACGC AGGAAAGTCT TCAGGGAAAC ATTGAAGGCC TCCGGTGCGG TTCTCATTCT GGTTCTGCTG ATGGCCTGGC TTGCCGGGGG CTTCTTGAAG AAGGTGCGAC CCGGCCCCGC CCAACCCGTG GCGCCGGAGC CCGGAGTCAG GATGCAGGCA GTGGAGCGGC GCACTTTCCC GACAGTCGTC GAACAGGTCG GAACGGTCAG ATCCCGGGCA GAGGCCCGCG TCTCCAGCCG AATCATCGCG CAGGTCAGGG AAATCCTGGT GCGCGAAGGC GATTCGGTGG TCGGTGCGGA TGAGAAGGAC GGGAAACCGA CGGTCATGGC GCGCCTGGAT GACGGCGACA TTCAGGCCCG TCTGCGCCAG GCGGAGGCAC AACTGGCTGC GGTCGGGAGG GCCAAGGAAG TTTCCTCCGC CCGGTTGGGC GCCGCCAGGT CCCAGGTGGA GGCAGTGCGG GCGAACCGCG AAAAAGCGTT TTCCGACTAC AAACGCTACG CGGAGCTGAA GCGTGACCAA GCCGCCACGG GCCAGCAGGT CGAGCATGCC CGCGCGCTTC GAAATGCCAC GGAAGCTCAA CTGCAGGGTT CGATCAAAGA AGTGCAGGTC GCTCGAGGAG AGCTCGAGAG GGTGGAGGCT CAGCGGGAAC ATGCGGAGGC TGCCGTTGCG GAAGCTCGGG CCATGCTGGA CTACACGATT ATCCGGGCTC CTTTTTCGGG CAAGGTGATC CGGAAGATGG TCGATGTGGG GGACATGGCC TCCCCGGGAC AGCCCCTGTT CCTGCTGGAA GCCCGGTCGG CACCGGAGCT GCACGCCCAG GTGACGGAAT CCCTGGTGCC CTTCCTCAAG ACGGGTCAGG AATTCAGCAT TCGAATCGAT GCCCTGGACT GCTCGTTCCC GGGGGTACTC AGCGAAATCG TTCCCAGGTC CGACCCCGTC ACCCGAACGG TCCAGGTCAA GGTGAGTCTC CCCCCGGACG AGCGGCTCAT CAATGGTCTC TACGGCAGGC TTCCCATTTC TCGCGGTCAC TATGAAACCC TGGTGGTGCC TGCGGCCGCG GTGCAACAGA GCGGCCAGCT CGATTTCGTG CGCGTGGTGG GTGCGGACGG CGCAACGCGC AGGCGCTTTG TCACTCTCGG CCGGCGACAA GAGGGCCTTG TCGAGGTTCT CACGGGTCTG AAGGAAGGCG AGAAGGTTGT CGCGCCATGA
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Protein sequence | MNKAQEDEKR RKVFRETLKA SGAVLILVLL MAWLAGGFLK KVRPGPAQPV APEPGVRMQA VERRTFPTVV EQVGTVRSRA EARVSSRIIA QVREILVREG DSVVGADEKD GKPTVMARLD DGDIQARLRQ AEAQLAAVGR AKEVSSARLG AARSQVEAVR ANREKAFSDY KRYAELKRDQ AATGQQVEHA RALRNATEAQ LQGSIKEVQV ARGELERVEA QREHAEAAVA EARAMLDYTI IRAPFSGKVI RKMVDVGDMA SPGQPLFLLE ARSAPELHAQ VTESLVPFLK TGQEFSIRID ALDCSFPGVL SEIVPRSDPV TRTVQVKVSL PPDERLINGL YGRLPISRGH YETLVVPAAA VQQSGQLDFV RVVGADGATR RRFVTLGRRQ EGLVEVLTGL KEGEKVVAP
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