| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3378 |
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| Symbol | |
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| ID | 4458319 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 4145189 |
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| End bp | 4146685 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639704150 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_847486 |
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| Protein GI | 116750799 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.106709 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGTC AATCGGGGCG CGGTGTCGCG AGACGTCGCT TTGAGAGCCA CCGTGCCGTC
TTTCTGTACG TACTGGGCGT GATCGCCGCG ATCACCGTTT CGGGTTGTTC AACCACCGGC
GATTCCGCCC CGAATGCGAA CCCCGCGCTC CCGATCGAAT CCCCGGTCCT CCCGCCCACG
GCTCCGTCGA TGGAGGACTC GGCCGGGAAG GGCGGCACCC TCACGGTGGA CCGTGCAATA
CAGGAAGCCC TGAGCGTCAG TCCCGAGCTG GACCAGGCCA GAAGCAGAGT GGCCGCCGCC
GGCGAACAGG TCAGGCAGGC CGAAGCCATG TTCTATCCGC GGATCGTGCT CTCCCAGGAG
TACAACACCA CGGACAATCC GGTTTATGCA CTGATGTATA TCATCAACCA GAGGCGTTTC
CAGCCGACGA TCGCCTTCAA CGATCCCGGG CGGCAGCACG ATGTGGTCTC CTCGGCTCAG
GGAGAATGGG CGCTGTTCGA AGGCGGAAGC CGACGGTTCG ACCGGAGCGC GGCGTTGAAT
CAGCGCCGGG CTCAACAGGA CGAAGTTTTC GCCATGCGCA ACCAGCTCGT GGCAAGGGTT
ACCGAGACCT ACTACCAGTG GTTGCAGTCG TTGGTGTTCA TCGACGTGGC GGAGAAAACG
CTCGAAGCCG CTCAATTGGA TCAAAGACTC GGTGAGGCGC GCTACAAGGC CGAAATGGCC
TTGCCCAGCG AAGTGCTCCG GTTGAAAGCC CGTACGGCCG AGGTGCGCGG CAGCCTGGTC
ACTGCGAAAT CGAGCGCCAG GCGTTTCCAG GCTGCTTTGG AACGCCTCAT TGCCAGGTCC
ATTACCCAGG GGGAAATCCC GCGTCCGGAG CTTTCGTCGG ATGAGCCGCC GCTTTCAGCC
GCCGCGGAAG ACGCCGATGC GCTCGTGGCT CAGGCTCTGA ACCGGCGGCC GGAAATGGCG
GCCATACGGT CGATGGTTCT CGCCGCGGGG GACCGCGTCA AGTCCGCTCG GGGGGGACTC
CTGCCCAAGC TGTCCACCAG CGCGCGTTAC CAGTGGGATT CGGAGGAGAT CGTGGACGGC
GAGGGAAGCT GGATGTTCGG CATACAAGCC GCCTGGCCGA TTTTTGAGGG GGGAATGACG
TGGTCGCGGA TCGCTGAGGC CCGGTCCCGT CTGCAGGAAG TGCAGGCGAA GGGCAGGCAG
ATCGCGCTGG ACATCGCCCT GGAAGTCCAA CAGGCGGCCC TGGCCGTCCA GGAGGCTGCG
GAGAAGATCA AGGTTGCCGA CGAGCGTCGG GCATGGGCCG AGAAGGCCCT GCGGGAGGTG
CGGTTCATTT TCGAGAAGCA GATTGCCGGC GTGGACTCCC TGCTGCAGGC CGAAGTGTCG
TGGAACCAGG CGGAAGTGGC CTACACGGCG GCCGTATTTG AAGGCCGGAT TGCCCATGCG
CTGCTCAGAA AATCCCTGGG GGACTTCGCG GAATGGTTGG AGGCCAAGCA TGAATAA
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| Protein sequence | MKSQSGRGVA RRRFESHRAV FLYVLGVIAA ITVSGCSTTG DSAPNANPAL PIESPVLPPT
APSMEDSAGK GGTLTVDRAI QEALSVSPEL DQARSRVAAA GEQVRQAEAM FYPRIVLSQE
YNTTDNPVYA LMYIINQRRF QPTIAFNDPG RQHDVVSSAQ GEWALFEGGS RRFDRSAALN
QRRAQQDEVF AMRNQLVARV TETYYQWLQS LVFIDVAEKT LEAAQLDQRL GEARYKAEMA
LPSEVLRLKA RTAEVRGSLV TAKSSARRFQ AALERLIARS ITQGEIPRPE LSSDEPPLSA
AAEDADALVA QALNRRPEMA AIRSMVLAAG DRVKSARGGL LPKLSTSARY QWDSEEIVDG
EGSWMFGIQA AWPIFEGGMT WSRIAEARSR LQEVQAKGRQ IALDIALEVQ QAALAVQEAA
EKIKVADERR AWAEKALREV RFIFEKQIAG VDSLLQAEVS WNQAEVAYTA AVFEGRIAHA
LLRKSLGDFA EWLEAKHE
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