Gene Sfum_3372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3372 
Symbol 
ID4458313 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4137526 
End bp4138413 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content55% 
IMG OID639704144 
Productmetal dependent phosphohydrolase 
Protein accessionYP_847480 
Protein GI116750793 
COG category[T] Signal transduction mechanisms 
COG ID[COG1639] Predicted signal transduction protein 
TIGRFAM ID[TIGR00277] uncharacterized domain HDIG 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.479955 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCGGG AACTCGATGA ATTTGAAGTC AAAGCGCTCC ACTACGAACT CCTTCTCAAA 
GACATCATCG CTACTGCGGA AAAACTGCCT GCCTTTCCCT CCACAGCCTG GCAGGTCATG
TCCCTGATCA AAGGAACGGG ATCGAACGAA GAAATCGAAC GACTGATCAA GAGTGATCCC
ATCATTTCTT CAGGAGTGCT TGCTCTGAGC CAGTCGGGAC ATTACGGTCG CAATTTTGCC
ATCGGTTCTC TCCTGGATGC CGTCCTGGTC CTCAAGGGTG AGAAGCTGAT CGAGATGATC
CTGGCTGCCA GCGCCTCGCG CTATTTTGCC GGGGAAATCT CCGGCCAGGA AATGCATCAT
CGCCGGTTGT GGCTCCATTC GGTCGCCACG GCCCTGACAG GCGAAAGACT GGCCCGCGTG
CTCAATCAAA AGAAGCCTCT GACCGTTTAT ACGGCGGCAC TTCTCCACGA TGTCGGAAAG
ACGGTGCTCG ATCTGTACGC GAAAATCTAC CTTCACGCCA GTCTCAAGCA GCTCAAGCAA
AGCCATTCGA AGTTGATCGA CATCGAAAAG AAGGCCCTGG GTGTGAATCA CCAGGAACTG
GGAGAGTTGA TCGTTCGACG CTGGAAGTTT CCCGCAGACG TGGTTTCCGC GGTGGGAAGC
CATCATACCC CGGAGGCCGC CCCCTACGAG CAGCACATTG CGGCCACCGT GTATGCGGCC
AACCGGATCG TGAACGCTTT CGATCAGGAT GATGTCGCAG ACGGCCCCTT CGACCCGGAT
AACGATCCCA TTTTCCAGAA GCTCGGCATC AACGATATCA TCCTCAAGCA GATGCAGAAC
CAGCTCGAAG TGGACATGGA CGACATGAAC ATGTTCCTCC TGACCTGA
 
Protein sequence
MIRELDEFEV KALHYELLLK DIIATAEKLP AFPSTAWQVM SLIKGTGSNE EIERLIKSDP 
IISSGVLALS QSGHYGRNFA IGSLLDAVLV LKGEKLIEMI LAASASRYFA GEISGQEMHH
RRLWLHSVAT ALTGERLARV LNQKKPLTVY TAALLHDVGK TVLDLYAKIY LHASLKQLKQ
SHSKLIDIEK KALGVNHQEL GELIVRRWKF PADVVSAVGS HHTPEAAPYE QHIAATVYAA
NRIVNAFDQD DVADGPFDPD NDPIFQKLGI NDIILKQMQN QLEVDMDDMN MFLLT