Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_3369 |
Symbol | |
ID | 4458310 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 4131753 |
End bp | 4134284 |
Gene Length | 2532 bp |
Protein Length | 843 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639704141 |
Product | DEAD/DEAH box helicase domain-containing protein |
Protein accession | YP_847477 |
Protein GI | 116750790 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4581] Superfamily II RNA helicase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCAGGCGC TGGAGAAGCT CGACGCTTCC GATGTATTGG TTACCGCGCC CACCGGGGCC GGAAAGACCT ATATCGCCGT CGAGGCGATC CGGAAAGTGT TCGGTCGAGG CGGCAAGAGC TGGTACGCAT CCCCCCTGAA AGCGCTTTCG AACTCGAAAT ACGAAGAGTT TATAGCCGAT TTCGGCGCAT CGAACGTGGG AATACTCACC GGGGACCGCA AGGAAAATGC GCAGGCCCCG ATAATCGTGG GAACGACCGA GATCCTGCGA AATCAACTCT ACGACACCAT GCACCGGGGA GAAGATCTCG AGGTCGACCT GGTGGTGCTC GACGAAGCCC ACTATCTCGG CGACGAGGAC CGCGGAGTGG TCTGGGAAGA GGTCCTGATC TACCTGCCTC CGCGCGTGAA GCTGCTCCTG CTTTCGGCCA CCGTCGAAAA TGCGGGGGAT ATCTGTGCAT GGCTCGAGTG GCTGCGCCGC TCCCCCTGCT CCTGGGTCAA CACCGAGGAG AGACCCGTCC CGCTTTTCCC CCTCTTTGTC TTTCCGTCGG GCGAGCTGAC TCCCCTGGGG ACACGGCGCG GGTTGTTCGC AAAGATTCGC GGCGTGGAAC CCGGGTCGTT TTCACGGAAC GAATTCCCCA ATATCCCCGG GCTTATGGAG GTGCTGGACC GCGCCAATCT CCTCCCCGCG ATCTTCTTTC TGAAGTCGAG GGCCGATTGT GACCGGGCAA TCTCCCTGTG CGGGGCGCCG CGCCGCAAAT CGGAAGAGGT GAAACAATTT CACAGGAGGC TGAGCGGGCT CCTCGACTCG TTCCCGTTTC TCAGAAACCA CCAACACCTG TCCATCCTCC GGGAAACCGC GGTCGGGGCG CACCACGGCG GCCAACTGCC GCACTGGAAG CTCCTTCTTG AAAGACTCAT GCAGCAGGGA CACCTGCGGG CCATCTTCTC GACATCCACG GTGGCTGCCG GAGTGAACTT CCCCGCGCGC ACGGTTGTCG TCCTGCAAAG CGACCGGTTC AACGGCAGGG AATTCCTCGA GCTCACCGCC ACGGACCTGT TGCAGATGAC CGGCCGAGCC GGACGGCGCG GAATGGATGA AATCGGTTTT GCGCTCGTCG TTCCCGGACC CTTCCAGAAC CCCCAACTGA TCCACGATCT GCTGAAAAGC CCCCCGAATC CGATCACCAG TCAGATTCGG GTGAACCATT CGATGGTCCT GAACCTGCTT CTCTCCCACG CTCCCGAGGA AATACGCACC CTGTTCGGCG CGTCCCTGGC CACGTTTCAG AACCTCCATC GCGAAAAAGA CATCTCGCGG GAACTCGATG AGGCGCGCAT CGAACTCGAT AAATATATTC CCGAAACGGC GTGCGGATCG GTGGAACAAC TCGCCGAGAT TCGCCCTCGA TACGACGCGT TGAGGGAAAT GCGGCGAAGA GCCAAGAAAA ACCTGAGGAG GCAAACGACG TCCGGTTCCA TGGGATCATT GCTGGTTCCG GGCAGAGTAT TTCGCAGCAG GCGGGGTACC CCCTATATTG CGGTCGCACA TCCCCAGATC TCCCGAAGGT CCGTCGAAGC GGTACGGCTG GCGGAGCCCC TGCGCTTTCG CAGGGACCAC GTACGGACCC ATCACGTGGT CTTCCATCGC ATCATGGACC TGGGCGAGCT CATCACGCCC CTGCCTTCCC TCAAGAACCG GCAGGAATGG GAGGCGTTGA TGTTCGAAGC GACCGAGCAT CCGCCGCGCC CGATGCGCTG CCGGCCCGAG GGGGAGCCGA CAATGCCCGT CCCGGACGCG GTGCGCGAGA TCAACGAGCT GACCGTTCAA CTGGCGGCGC TGCCCTGCGG CACGTGCGCG CTCTTCGCCC CGTGTCTGAA AGGCACTTCC CACCCTTTCA CCGCTGCGCT GCAACGCCAC TTCGAATACC GTGCACGCGT GCTGACCATC CAGGATCAGC TCTGGCAATC CTTCCTCAAG CACCTCCGTC TCCTCGGGGA TGAAGGATAC GTGGACGCCG CAGGGCGGCT CACCCGTGAC GGCACCTGGG CATCGAAACT CAGGCTGGAC CAGCCGCTGC TCATCTCAGA AGGGATCCGT CGCAACGCTT TCCCCGCCGA AGACCCCGAA CTGCTGGGTG CCCTCATTGC GCCTTTCGTC ATGGACCGGG AAAGGCACGG GGACATCCAG CTCTCCTCGC TGGTCTGGAA ATTCCCGGGT CTGGCCAAGC CTTTTTTCCG CATGTTGCAC AGTCTCCAGC CTCTGCGGGA AAGACTCCAG GCCGAGGGCT TCTCCGTTCC CCCCATGCCC TTCTGGGCTA CGGCAACCGT CTATCACTGG GCCGGAGGAT CGTCCTGGCA GACCGTCAGG GAAATCTCGG GCATGGATGA AGGGGACCTT GCCATGCTCA TCCTGCGGAC CGCCGATCAC CTCCGGCAGA TCGAGTCCCT CTCGGAGACA CACCCATCCC TGGCCGCCGC CGCCCGTCGC GCCATCGAGC TGATTCTCCG GGAACCCGTG CTGGTCGAAT AG
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Protein sequence | MQALEKLDAS DVLVTAPTGA GKTYIAVEAI RKVFGRGGKS WYASPLKALS NSKYEEFIAD FGASNVGILT GDRKENAQAP IIVGTTEILR NQLYDTMHRG EDLEVDLVVL DEAHYLGDED RGVVWEEVLI YLPPRVKLLL LSATVENAGD ICAWLEWLRR SPCSWVNTEE RPVPLFPLFV FPSGELTPLG TRRGLFAKIR GVEPGSFSRN EFPNIPGLME VLDRANLLPA IFFLKSRADC DRAISLCGAP RRKSEEVKQF HRRLSGLLDS FPFLRNHQHL SILRETAVGA HHGGQLPHWK LLLERLMQQG HLRAIFSTST VAAGVNFPAR TVVVLQSDRF NGREFLELTA TDLLQMTGRA GRRGMDEIGF ALVVPGPFQN PQLIHDLLKS PPNPITSQIR VNHSMVLNLL LSHAPEEIRT LFGASLATFQ NLHREKDISR ELDEARIELD KYIPETACGS VEQLAEIRPR YDALREMRRR AKKNLRRQTT SGSMGSLLVP GRVFRSRRGT PYIAVAHPQI SRRSVEAVRL AEPLRFRRDH VRTHHVVFHR IMDLGELITP LPSLKNRQEW EALMFEATEH PPRPMRCRPE GEPTMPVPDA VREINELTVQ LAALPCGTCA LFAPCLKGTS HPFTAALQRH FEYRARVLTI QDQLWQSFLK HLRLLGDEGY VDAAGRLTRD GTWASKLRLD QPLLISEGIR RNAFPAEDPE LLGALIAPFV MDRERHGDIQ LSSLVWKFPG LAKPFFRMLH SLQPLRERLQ AEGFSVPPMP FWATATVYHW AGGSSWQTVR EISGMDEGDL AMLILRTADH LRQIESLSET HPSLAAAARR AIELILREPV LVE
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