Gene Sfum_3368 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3368 
Symbol 
ID4458309 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4130334 
End bp4131548 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content63% 
IMG OID639704140 
Productmajor facilitator transporter 
Protein accessionYP_847476 
Protein GI116750789 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGTCA CCAGCAGCGT CAAGATCACG TCGAGTCATA TTCCCACAGG GATTTGGGTT 
CTTGGTTTCG TGAGTATGCT GATGGACATC TCGTCGGAGA TGATCCACAG CCTGCTGCCC
CTGTTCATGG TCACGGCGCT GGGGGCCGGC GCCTTTGCCG TCGGCGTGAT CGAGGGGCTC
GCCGAGTCCA CGGCGCTGAT TGTCAAGGTA TTCTCGGGGA CGTTGAGCGA TTACCTCGGC
AAGCGCAAAG GGTTGGCCCT GTTGGGCTAT GGGCTTGGCG CGTTGACCAA GCCGCTGTTT
GCGATTGCAT CCGGCATCGA CCTTGTGTTC ACCGCACGCA TGCTGGATCG GATCGGCAAA
GGGGTGCGCG GTGCGCCGCG CGATGCGCTG GTTGCCGATA TCGCACCGCC CCACTTGCGC
GGTGCGGCAT TCGGCCTGCG CCAGTCGTTG GACACCGTGG GAGCGTTTGT CGGCCCGTTG
CTGGCGGTCG TATTGATGCT CCTATGGGCG AACGATTTTC GTGCCGTGTT CTGGGTGGCG
GCGATTCCGG GTCTGATGGC GGTCGCGCTC CTGTTCCTCG GCCTTCACGA GCCGGCACGT
CATCCGGGCG ACAAGCGCGG CAATCCGATC CGCGGGGAGA ACCTGCGCCG TCTTGGCGGC
GCTTATTGGT GGGTGGTCGG CGTCGGCGCG GTGTTCACCC TGGCACGTTT CAGCGAGGCT
TTCCTCGTCC TGCGAGCCCA ACAGGGCGGC ATTCCGGTTG CTTTCGTGCC GCTTGCGATG
GTGGTGATGA ATGTCATCTA CTCGTTGTCT GCGTACCCAT TCGGCAAGCT TTCCGATCAT
GTGAGCCACA CAAAACTGCT GGCACTCGGA TTGCTCGTTT TGATCGGGGC CGACCTGTTA
TTGGCGATGA GCGATCACTG GGAGGTCATG CTTGCGGGTA TCGGCCTTTG GGGTGTGCAC
ATGGGCATGA CCCAGGGGTT GCTCGCGACC ATGATCGCGC ATACGGCACC GCCGGACCTG
CGCGGCACAG CCTACGGCTT TTTCAACCTG GTGAGCGGAC TGGCGATGCT GCTGGCAAGC
GTGTTGGCCG GACTGCTTTG GGATCGTCTC GGCGCGGCAT ACACCTTCTA TGCCGGCGCG
GTGTTTTGCA TCCTCGCCCT CGGCGGCCTT GTCCGGACGG CGGGCCGGCG ACCGGTTCCA
CTTCAGGAAC CTTGA
 
Protein sequence
MQVTSSVKIT SSHIPTGIWV LGFVSMLMDI SSEMIHSLLP LFMVTALGAG AFAVGVIEGL 
AESTALIVKV FSGTLSDYLG KRKGLALLGY GLGALTKPLF AIASGIDLVF TARMLDRIGK
GVRGAPRDAL VADIAPPHLR GAAFGLRQSL DTVGAFVGPL LAVVLMLLWA NDFRAVFWVA
AIPGLMAVAL LFLGLHEPAR HPGDKRGNPI RGENLRRLGG AYWWVVGVGA VFTLARFSEA
FLVLRAQQGG IPVAFVPLAM VVMNVIYSLS AYPFGKLSDH VSHTKLLALG LLVLIGADLL
LAMSDHWEVM LAGIGLWGVH MGMTQGLLAT MIAHTAPPDL RGTAYGFFNL VSGLAMLLAS
VLAGLLWDRL GAAYTFYAGA VFCILALGGL VRTAGRRPVP LQEP