Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_3368 |
Symbol | |
ID | 4458309 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 4130334 |
End bp | 4131548 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639704140 |
Product | major facilitator transporter |
Protein accession | YP_847476 |
Protein GI | 116750789 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGTCA CCAGCAGCGT CAAGATCACG TCGAGTCATA TTCCCACAGG GATTTGGGTT CTTGGTTTCG TGAGTATGCT GATGGACATC TCGTCGGAGA TGATCCACAG CCTGCTGCCC CTGTTCATGG TCACGGCGCT GGGGGCCGGC GCCTTTGCCG TCGGCGTGAT CGAGGGGCTC GCCGAGTCCA CGGCGCTGAT TGTCAAGGTA TTCTCGGGGA CGTTGAGCGA TTACCTCGGC AAGCGCAAAG GGTTGGCCCT GTTGGGCTAT GGGCTTGGCG CGTTGACCAA GCCGCTGTTT GCGATTGCAT CCGGCATCGA CCTTGTGTTC ACCGCACGCA TGCTGGATCG GATCGGCAAA GGGGTGCGCG GTGCGCCGCG CGATGCGCTG GTTGCCGATA TCGCACCGCC CCACTTGCGC GGTGCGGCAT TCGGCCTGCG CCAGTCGTTG GACACCGTGG GAGCGTTTGT CGGCCCGTTG CTGGCGGTCG TATTGATGCT CCTATGGGCG AACGATTTTC GTGCCGTGTT CTGGGTGGCG GCGATTCCGG GTCTGATGGC GGTCGCGCTC CTGTTCCTCG GCCTTCACGA GCCGGCACGT CATCCGGGCG ACAAGCGCGG CAATCCGATC CGCGGGGAGA ACCTGCGCCG TCTTGGCGGC GCTTATTGGT GGGTGGTCGG CGTCGGCGCG GTGTTCACCC TGGCACGTTT CAGCGAGGCT TTCCTCGTCC TGCGAGCCCA ACAGGGCGGC ATTCCGGTTG CTTTCGTGCC GCTTGCGATG GTGGTGATGA ATGTCATCTA CTCGTTGTCT GCGTACCCAT TCGGCAAGCT TTCCGATCAT GTGAGCCACA CAAAACTGCT GGCACTCGGA TTGCTCGTTT TGATCGGGGC CGACCTGTTA TTGGCGATGA GCGATCACTG GGAGGTCATG CTTGCGGGTA TCGGCCTTTG GGGTGTGCAC ATGGGCATGA CCCAGGGGTT GCTCGCGACC ATGATCGCGC ATACGGCACC GCCGGACCTG CGCGGCACAG CCTACGGCTT TTTCAACCTG GTGAGCGGAC TGGCGATGCT GCTGGCAAGC GTGTTGGCCG GACTGCTTTG GGATCGTCTC GGCGCGGCAT ACACCTTCTA TGCCGGCGCG GTGTTTTGCA TCCTCGCCCT CGGCGGCCTT GTCCGGACGG CGGGCCGGCG ACCGGTTCCA CTTCAGGAAC CTTGA
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Protein sequence | MQVTSSVKIT SSHIPTGIWV LGFVSMLMDI SSEMIHSLLP LFMVTALGAG AFAVGVIEGL AESTALIVKV FSGTLSDYLG KRKGLALLGY GLGALTKPLF AIASGIDLVF TARMLDRIGK GVRGAPRDAL VADIAPPHLR GAAFGLRQSL DTVGAFVGPL LAVVLMLLWA NDFRAVFWVA AIPGLMAVAL LFLGLHEPAR HPGDKRGNPI RGENLRRLGG AYWWVVGVGA VFTLARFSEA FLVLRAQQGG IPVAFVPLAM VVMNVIYSLS AYPFGKLSDH VSHTKLLALG LLVLIGADLL LAMSDHWEVM LAGIGLWGVH MGMTQGLLAT MIAHTAPPDL RGTAYGFFNL VSGLAMLLAS VLAGLLWDRL GAAYTFYAGA VFCILALGGL VRTAGRRPVP LQEP
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