| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3367 |
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| Symbol | gatB |
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| ID | 4458308 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 4128760 |
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| End bp | 4130193 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639704139 |
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| Product | aspartyl/glutamyl-tRNA amidotransferase subunit B |
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| Protein accession | YP_847475 |
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| Protein GI | 116750788 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) |
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| TIGRFAM ID | [TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTATGG ATCACGAGGC GGTAATAGGG CTCGAAATAC ACGTCCAGCT GAATTGCGAA
ACGAAAATGT TCTGCCGGTG TCCGAGCAGG CCGGGGGATG AACCGAATCG AAACACCTGC
CCGATATGTC TCTGGCTGCC GGGCAATCTC CCCAGGTTCA ACCGGGAGGC ACTCGAGCAG
GCGATTCTCG CCTCCCTTGC GCTGGACTGT GAAATTCAAA AGGAAAGCGC ATTCGATCAG
AAAGTCTATT ATTATCCGGA CTTGCCCAAG GGTTACCAAC TTTCCCAGTT CCACATGCCT
CTGGCGATGA ACGGTCATTT GAACGTCACC GATGCGAACG GAGCAAGGAA GACCATCCGG
ATTCGGAAAG TACACATGGA AGAGGACGTC GCACGGCTCG TCCATGAGAA TGAAGGAAGG
ACGCCCGTGA GCCTGGTGGA CTTCAACCGC GCGGGGATGC CCCTGGTGGA GATCGTGACG
GAGCCCGATC TGCGCAATTC CGGGGACGCG ATGGAGTTTC TGCGCTGCCT CATCCGGCAG
ATCCGGTACT CGGGCAGTTC GGAGTGCAGC ATGGAACAGG GGACGATGCG CGTGGACGCC
AATGTCTCCA TCCGGCCCGC GGGCAGCGAT CAATTCAACA CGAAGGTGGA AATCAAGAAC
ATGAATTCCA TCCGGAGCGT GGGGGATGCC ATCGCGTATG AAATAGAGCG GCAGAAGGAA
TGTCTCGTGG ACGGAGAGCC CATCGTGCTT CACACCCGCC TCTGGGATCC GGAAAAACGC
GTGACGTCTC CCATGCGGGG GAAATTTGAA GGCCCTTGCG TGCCGGATCC CTCGGTGCCG
CGGATCGTGA TCGAAAGTGA ATACCTCGAT GAGGTGCGCA CACGCCTGCC GGAAATGCCC
GAGCAGAAGG CGCAACGTTT TGTGAAGCAC TATGGGCTTA CTTACGAGGA TGCCGCGACC
ATGTGTTCCG AGCGGTCCGT GTCCGAATAC TTCGAAGCGG TGGCGGACTG CGGCGTGTCG
TCGCGGCTCG CGGCCCAGTG GATTGCCGGC CAGGTGCTGC CCCTGCTCAA GGAGTGCGAT
GAAACGGTTT CCACGAGCCG CCTGACGCCG GATCGCCTCG CGGGTCTGCT CAAGATGCTG
GAACGCGATG AAATCAACAG CAGCGCGGCG AAGGAGATTC TCGGAAAGCT CCGGGGAAGC
GACGCTCCAC TAAAGGTAAT TGTTGAATCG GGGGGGTTCA GGCAGGTTTC GGAGGCCGAC
CAACTGGAAG CGGTCGTGGA TCGGGTCCTG GAAGAAAACC CTTCCGCCGT GGAGAATTTC
AGAAAAGGGG CATCGAAAGC CCTGGGATTC CTCATGGGCC AGGCGATGCA GGCAACCCGG
GGCAAGGCGA ACCCCCGCCT GTTGAAGGAA ATCATGACGC GCAAGCTCGG CTGA
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| Protein sequence | MSMDHEAVIG LEIHVQLNCE TKMFCRCPSR PGDEPNRNTC PICLWLPGNL PRFNREALEQ
AILASLALDC EIQKESAFDQ KVYYYPDLPK GYQLSQFHMP LAMNGHLNVT DANGARKTIR
IRKVHMEEDV ARLVHENEGR TPVSLVDFNR AGMPLVEIVT EPDLRNSGDA MEFLRCLIRQ
IRYSGSSECS MEQGTMRVDA NVSIRPAGSD QFNTKVEIKN MNSIRSVGDA IAYEIERQKE
CLVDGEPIVL HTRLWDPEKR VTSPMRGKFE GPCVPDPSVP RIVIESEYLD EVRTRLPEMP
EQKAQRFVKH YGLTYEDAAT MCSERSVSEY FEAVADCGVS SRLAAQWIAG QVLPLLKECD
ETVSTSRLTP DRLAGLLKML ERDEINSSAA KEILGKLRGS DAPLKVIVES GGFRQVSEAD
QLEAVVDRVL EENPSAVENF RKGASKALGF LMGQAMQATR GKANPRLLKE IMTRKLG
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