Gene Sfum_3364 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3364 
Symbol 
ID4457646 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4123011 
End bp4124249 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content60% 
IMG OID639704136 
Productmajor facilitator transporter 
Protein accessionYP_847472 
Protein GI116750785 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2223] Nitrate/nitrite transporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGACC AGCAAACGAC GATGCCGAGA TGGGTCCCCC TGCTTTTGGG CTTACTGGGT 
AGCACCACAT GCGGTATGCT TCTTTACGCA TGGAGTGTTT TTATCAAGCC GTTGAACGCG
GAATTCGGGT GGTCCCGCGC AGAGATCGCC ATGGCGTTCG CGATCTGTTG TCTGATTTTC
GGGTTGATGA CGTTTCCCGC AGGGCGATTG AGCGACAAGA TGGGTCCCCG CAAGGTTGTT
ATGACGGGCG GTGTCCTGCT GGCGATCGGA TTCATCCTGT CGGGATTCAT CCAGTCAAAG
TATCAGCTCT ACATTACGTA CGGTGTCATT GCCGGTTTCG GCGGCGGGAT GATCTACTTG
CCGCCCATCG CGACGGCGCC CAAGTGGTGG CCGGACAGAC GGGCGCTCGC TACGGGTTTC
GCGGTGGTAG GTCTGGGTCT CGGATCGTTT CTCATGGGCC CCCTGGCGAC CTACATCATT
GAGAAACCCG GCATGGGATG GCGCTACGTG TTCTGGTACT GCGGCGTTGC CATGGGGATC
ATGGCGCTGA TTGCCGGTGC TTTTCTCGAG CCGCCGCCCG CGGGCTGGAA GCCGGCCGGT
TACACTCCTC CCGCGCCTCC TGCGGGCGCG GCAGCACCCA AGGTGACCCG CGACTGGACG
TACGAAGAGG CCAAGGGGGA TACCAAGTTC TGGCTGCTCT ACCTGGCCTA CTTCTGCGGT
TCGTTTGCAG GCTTGATGGT CATCGGACAT CTCGCCGGTT TTGGAAGAGA CGCCGGTCTT
ACGGCCATGG CCGCCGCCGG TGCGGTCAGC TCCCTTGCCT TCAGCAATGC GGCGACGCGT
ATTCTTTCCG GCTGGTTTGT TGACAAGATC GGTATTCGAG TCTACTTTGC CGCACTGTTT
GCCTTGCAGA CAGCGGCGAT GATCGCGATT TTTCAGCTCG GCGGCAGTGT CGTCGGCTTG
TCGATCGTTG CCATCGTCAT CGGCTGGAAC TATGGCGCCA TGTTTACATT GTTCCCGGCC
ACGTGCCTCC AGTTCTACGG GCCGACGGCG CAGGGCAGCA ACTACGGCCT CCTGTTTACG
GCGTGTGGTC TCGCCGGGTT TGCCGGTCCC TGGGTCGGCG GCTGGCTGAA GGATACGACG
GGGACGTACT ACCTTCCCTT CCTTTGCGCA GCAGCTCTGT GCGCCCTCGG AACGGCGATC
GTTTTCATGA CGAAGCCGCC GGAGAAGAAA CACGCATAG
 
Protein sequence
MADQQTTMPR WVPLLLGLLG STTCGMLLYA WSVFIKPLNA EFGWSRAEIA MAFAICCLIF 
GLMTFPAGRL SDKMGPRKVV MTGGVLLAIG FILSGFIQSK YQLYITYGVI AGFGGGMIYL
PPIATAPKWW PDRRALATGF AVVGLGLGSF LMGPLATYII EKPGMGWRYV FWYCGVAMGI
MALIAGAFLE PPPAGWKPAG YTPPAPPAGA AAPKVTRDWT YEEAKGDTKF WLLYLAYFCG
SFAGLMVIGH LAGFGRDAGL TAMAAAGAVS SLAFSNAATR ILSGWFVDKI GIRVYFAALF
ALQTAAMIAI FQLGGSVVGL SIVAIVIGWN YGAMFTLFPA TCLQFYGPTA QGSNYGLLFT
ACGLAGFAGP WVGGWLKDTT GTYYLPFLCA AALCALGTAI VFMTKPPEKK HA