Gene Sfum_3359 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3359 
Symbol 
ID4457641 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4115334 
End bp4115945 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content59% 
IMG OID639704131 
Producthypothetical protein 
Protein accessionYP_847467 
Protein GI116750780 
COG category[S] Function unknown 
COG ID[COG5652] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCAGGCAC CGTGCAGTGG AATACGGCGG GAGCTCATGA TTGCTCGAAT CACCCCGTGG 
GGGGTTGTCG CCGCGATTTT TGCGGCTCAA TTCTGCGGTG CGGTGGTTGT CGCCGCGGCG
TTTCAAATGG ACTTCAGGGA CCTCGGATTC CAGTTGCTCA TCCTGTTTCT GGGGTGTGTC
AGCGCCCTGG TTTTCCTGCG CCGCGACCGG GATAACCGCC CAAACGATTT CAGATGGTGG
ATTCCGCCCT GCCTTTATGC GCTCTTCATC TTCCTGATGT CCGACGATGC TTATCCGGAC
GCTCTGCCCC TGTTCGATAC GAACATTTTT CATCCCATCG AGTACCTCAC CTTGGCCTTT
CTGCTGGGCT TCGCTTTCGA TCGCGTCTTC CGGTACAGGA GCGCGGGCGG GCTGTGCCTC
TTTGTCTTTT GCACGGGAGG ATTCTGGGCT GTCTGTGACG AAATCCACCA GTCCTTCGTC
CCGGGACGCA CGCCGACCTT TGCCGACATC GCGATCGATT TCTTCGGGAT CGCCGCGGGG
TGCGCCGTTT ACCTGGCGTT CAGGCGGCTG CCTCTGATGA AACCCGGCGC AGGCGAAAAG
AGCCCCGCAT GA
 
Protein sequence
MQAPCSGIRR ELMIARITPW GVVAAIFAAQ FCGAVVVAAA FQMDFRDLGF QLLILFLGCV 
SALVFLRRDR DNRPNDFRWW IPPCLYALFI FLMSDDAYPD ALPLFDTNIF HPIEYLTLAF
LLGFAFDRVF RYRSAGGLCL FVFCTGGFWA VCDEIHQSFV PGRTPTFADI AIDFFGIAAG
CAVYLAFRRL PLMKPGAGEK SPA