Gene Sfum_3353 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3353 
Symbol 
ID4457635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4108703 
End bp4109641 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content62% 
IMG OID639704125 
Productglycosyl transferase family protein 
Protein accessionYP_847461 
Protein GI116750774 
COG category[R] General function prediction only 
COG ID[COG1216] Predicted glycosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCGAA AGGAAATGGG GGCTCTGAAC TTTTCCATCG TAATCCCCAC GTACAATCGT 
GCCGGACTGC TGGATCGCAC GCTCTTCAGC GTGAGCCGGT TGAGGGTCCC AACCGGGGCA
GAGGTCGAGT TGGTCGTTGT GAACAACAAT TCCACGGATA ACACTTCCGC GGTCGTCGGC
CGCCATGCCG ATGACTTCCC CTTCCCGGTC CGGGAAGTCA TCGAGACGAA ACAGGGCCTC
AACCATGCAC GCAACCGCGG AATCGTCGAG GGACGTCACG AGATGCTCGT CTTCCTCGAC
GACGACGTGA AGGTCAACCC CGAATGGCTG GCAGGATGCC GTGAGGCCGC CGAATCCAAC
GGGGCCGACT ACGTGGTCGG CCCGGTATTT CCGGATTACG TCGACGGCAA GCCCTCCCAT
GTGACGCCGC GGATCGAGAG GTGGGTGGAC TCGTGGTACA GTCGGCGAGG AGACGTCCCG
TTTCGATTCG AGGCAGCGGG CGGAGCCTTC CTGCCGGGGT GCAACTTTGC GGTCCGCAAG
TCTGTGGCGG AAGAGATCGG AGGATTCAGA CCGGATCTCG ACCGATGCGG CAAGGAAATG
CTTGCGGGAG GGGACACCGA ATTCGGATAT CGGCTGGTGG AATCCGGTAA GCAGGGCTGG
TATGAACCGC GCTGTTCCAT CCGGCACGCC GTTACCCTCG ACAAGCTCGG CAAGCCCGCC
TTGCGGCGGA GGGTCGCCGG GCTCGGACGC ACCTGGGCGG TGATGGAAAT CGTGCGGTCG
GGACCCCGCC CGATCCGCAT ACGCGAGTGG TGCGGCGGAC TGAAACCGGT GGCATTTTGC
CTGGCATGCG CAGTGAGCGG GGACCTGAAC CGGGCCTTCG AGCTCGAGCT GGACGCCAGG
TTCGCTTGGC ATTTTTTTCT GAGACGCAAC CGAAACTGA
 
Protein sequence
MHRKEMGALN FSIVIPTYNR AGLLDRTLFS VSRLRVPTGA EVELVVVNNN STDNTSAVVG 
RHADDFPFPV REVIETKQGL NHARNRGIVE GRHEMLVFLD DDVKVNPEWL AGCREAAESN
GADYVVGPVF PDYVDGKPSH VTPRIERWVD SWYSRRGDVP FRFEAAGGAF LPGCNFAVRK
SVAEEIGGFR PDLDRCGKEM LAGGDTEFGY RLVESGKQGW YEPRCSIRHA VTLDKLGKPA
LRRRVAGLGR TWAVMEIVRS GPRPIRIREW CGGLKPVAFC LACAVSGDLN RAFELELDAR
FAWHFFLRRN RN