Gene Sfum_3350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3350 
Symbol 
ID4457632 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4105513 
End bp4106316 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content54% 
IMG OID639704122 
Productmethyltransferase type 11 
Protein accessionYP_847458 
Protein GI116750771 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2230] Cyclopropane fatty acid synthase and related methyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGATTCC CTGAGTCTTC ATCATTTCAG GGGAAGTTGC TGCGATGGAT AAAGGGCTCG 
ATGGGCAAAG CTTTTCGAAT CGCCGTCAAC AATCCCCTGC TCAATTCGGC CGCTGCATGG
TGTGGTGCTG ATCCACTGCT TTGCCGGCTC CACCATCAGT GGGTGGGCCG CAACTTCAAT
CCGGCCAAGT CGCTTCAGGA AAACGTGGGC TTTTCGCACC GTGAGGATGT TGAAGCTGCC
CTGAGCAAAG TGCATGGTAC ACTTTGGTCG TTTGCTTGCG GGAATCTTGA GGAGGGCGCT
TCGATTCTCG ACCTAGGCAG TGGGACAGGC TTGATCGCCA AGCGCATGTC AAGCCGCTTC
AAGATTGTCG GGATCGACAT TTCGGAAGAA TTGACCAGGG TAGCTCGGAA AGAAAACCCC
CAATGCGAAT TCCACGTGGG AGATTTCCTG AGTTTCGAGT GCGGGTCCGA CTTCGCACTG
ATATACAGCA TAGGCGTCCT GATGTATTTC CCACCAAGCC GGCTGAGACT TTTCTTTGAG
AGAGCCCATG AAGTCCTCCG CCCTGGCGGA TATCTGTTCC TTCAATACTC GCACGCTCTG
AAGCGGAGCG ACCTTTGGTT TCCCGATATC AGCAGCATCA AGTATTCACC GGCCATTGTG
GAGCGGTGCG CTGCGGAATT CTTCAAGATC GAGGCCCATC ACCACAGCTT TTTCGAGGAA
AAGATCGTCC AGGACTACGA CAGGGATCCT TTCCCCATGG ACTCCTTTGT CAACGGCTAC
CTTTTGATTG CGCGAAGGCC CTGA
 
Protein sequence
MRFPESSSFQ GKLLRWIKGS MGKAFRIAVN NPLLNSAAAW CGADPLLCRL HHQWVGRNFN 
PAKSLQENVG FSHREDVEAA LSKVHGTLWS FACGNLEEGA SILDLGSGTG LIAKRMSSRF
KIVGIDISEE LTRVARKENP QCEFHVGDFL SFECGSDFAL IYSIGVLMYF PPSRLRLFFE
RAHEVLRPGG YLFLQYSHAL KRSDLWFPDI SSIKYSPAIV ERCAAEFFKI EAHHHSFFEE
KIVQDYDRDP FPMDSFVNGY LLIARRP