Gene Sfum_3347 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3347 
Symbol 
ID4458340 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4102156 
End bp4103364 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content57% 
IMG OID639704119 
Producthypothetical protein 
Protein accessionYP_847455 
Protein GI116750768 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGGCCA TCGGGAAAGT CAACCTGTTG TCGATCTCTA GTAGAATTCG ACAGACCATG 
CGGCGAGCAG GATTCCGCTG CGCAGAGTCT TTTCGAGGAC GCGGTAAACC GCATCGATCC
ATTGAGGAAT ATGCCCGATC AACTATCGAT TGGCTGTTTC GAGCTCAGGC CGCCACCTCC
GACGGCGGCG TTGCAGAGAG CTATAATGTG GTCAGTCGCA GTTGGAACCC CTCCTACCCG
GAGACTACCG GCTACATAGT CTGTTCGTTG CTGCGAGCCG AAAGCCTGCA TCTCAAGGAA
CCGGAGATCC TGCGTGATGC GGTGGTCAAG ATGGGTGACT GGCTGTTGTC AACGCAGATG
GAATGCGGTG CTTTTCCGGG AGGTCATATC GGCATTGCGC GTAAACACCC CACCGTCTTC
AATACGGGAC AAATCCTTAA GGGACTTACC GATCTCATTG ACAGGGGGTT GGACAGGGAT
GGACAGTTCG CCGGATGCGC CGCGCGCGCA GCCCACTGGC TGAGGGAAGT CCAGGAACCG
ACCGGTGAAT GGCGCCGTGG TCGCTCTCCT TTGACCCAGG GAACCGTTCA CTCGTATGAC
ATACGCACTG CCTGGGCTCT TGCCCGGTAT GGAAGATGCG TTTCGGATGA CGCAGCGATC
CTAGCAGGAA TCCGCAACGC CGCATGGTTG TGCTCGCTCG CTGACGCAGC AGCATGGTTC
CCCCATATGA GCTTCAGGCC CGACGATGCG CCATTGACTC ACACGGTCGC ATACACCGTC
CAGGGATTGT TGGAAATTGG GTTTCTTGCA GGCCGTTCTG AGTTCGAAGA AATAGCAATG
GCTGCCGCCT CGCGCATGAA GGATCTGCAG GACCCGCATA CGGGTGCGCT GCCTGGACGC
ATCGCCCCTG GTTATCGTCG CGCTTCATCC TGGTCCAGCA CGACGGGAAA TGCACAAATG
TCCATCATCT GGTTTCGTCT GGCCGAAGTC ACTGGCGATG AATCGTGGCG CAAGTCTGCG
CTGCACTCGA ATCTTTTCAA TTGCTCCCTT CAGGAGTTGG ATATGGATCA TCCCGACGAC
GGCAGACGGG GAGGACTCCG GGGATCATTT CCGGGGCACC TCGGCTATGG TCGTTACTGG
TACATGAACT GGACGCACAA GTTCCACCTT GACGCCTTGC TCGCCCAAAT GGGTATGTCC
ATCCATTAG
 
Protein sequence
MQAIGKVNLL SISSRIRQTM RRAGFRCAES FRGRGKPHRS IEEYARSTID WLFRAQAATS 
DGGVAESYNV VSRSWNPSYP ETTGYIVCSL LRAESLHLKE PEILRDAVVK MGDWLLSTQM
ECGAFPGGHI GIARKHPTVF NTGQILKGLT DLIDRGLDRD GQFAGCAARA AHWLREVQEP
TGEWRRGRSP LTQGTVHSYD IRTAWALARY GRCVSDDAAI LAGIRNAAWL CSLADAAAWF
PHMSFRPDDA PLTHTVAYTV QGLLEIGFLA GRSEFEEIAM AAASRMKDLQ DPHTGALPGR
IAPGYRRASS WSSTTGNAQM SIIWFRLAEV TGDESWRKSA LHSNLFNCSL QELDMDHPDD
GRRGGLRGSF PGHLGYGRYW YMNWTHKFHL DALLAQMGMS IH