Gene Sfum_3343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3343 
Symbol 
ID4458336 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4096743 
End bp4097699 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content57% 
IMG OID639704115 
Productglycosyl transferase family protein 
Protein accessionYP_847451 
Protein GI116750764 
COG category[R] General function prediction only 
COG ID[COG1216] Predicted glycosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.178674 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGAAA TTGACGTCAG CGTTATCATC GTTGCGTGCA ATCGACCCCC GGAATTAGAA 
CGAGCATTGC GGTCATCGTT CGCCCAGACG GGGGTCAGTT TCGAGGTTTT CGTATTCGAT
AACAGCACGG ATGGCCGTGT CGCTGCGTTG ATTTCCGAAA AATATCCCGA TGTAATCTAC
ATGAAAGCAC CATCGAACAC GGGACCGTGC GTTGCGCGTA ATCGTTGCGC CGAGCATGCG
GCGGGCGAAG TCCTGGTTTT CCTGGACGAC GATGCGTTCT TTACCGATAA CACCACCCTC
AAGAAGGTAT CCTGTGCAAT AAGGGCGGCC GAGGATATTG GAGGCCTGGC GATGACCTTT
GTCGAGCCTT TCAATCCGCG GAATAAGCTC GACAGTCCCT TGGCCGGGCG GGTTCCGCCC
GAGGGAATGA AATCGTTCGT GGCGTGTGCC GCAGCCGTGC GGAAATCCGC TTTTTGTGAG
GCTGGAAGCT TTCGTACCGC ATTGCTCATC GACGGTGAAG AGCGCGACCT CTGCGTTCGG
CTTCTGCTGA AAGGGTATCG GATCGGGTAC GTCGCCGTTG GGCCGATTGT CCACTCCAAG
AGTCCCATTC GAGACACTGG GAGCAGGGGT GTCCACGCAA TAGCCAACCA GATACTGTTT
GACTACTGGT ATCTTCCCGG CCCGCTCGTC TTGCCGTCGA TTCTCCGTCA TGCGTGGAAG
CTTCTGGTTT ACCGGTTCTC CTGGGAGAGC ATCCCTCCGA GATTGGAGGG AATCGCGCGA
GGCATCGCTG GGTGCCTGCG CTTCCGTGAC CTCCGCATGC CGATGACCTT TACACAGTGG
CGCTCTTATA TCAATCTTCC CCCTCACGGC GCCGAGCCCA TCCCCATGTA TCCAGCCGCC
CTGGAAGGTC ATGGAAGCAT CGCAGATATG AGCTATGTGT GCACCTCGAA TCCCTGA
 
Protein sequence
MAEIDVSVII VACNRPPELE RALRSSFAQT GVSFEVFVFD NSTDGRVAAL ISEKYPDVIY 
MKAPSNTGPC VARNRCAEHA AGEVLVFLDD DAFFTDNTTL KKVSCAIRAA EDIGGLAMTF
VEPFNPRNKL DSPLAGRVPP EGMKSFVACA AAVRKSAFCE AGSFRTALLI DGEERDLCVR
LLLKGYRIGY VAVGPIVHSK SPIRDTGSRG VHAIANQILF DYWYLPGPLV LPSILRHAWK
LLVYRFSWES IPPRLEGIAR GIAGCLRFRD LRMPMTFTQW RSYINLPPHG AEPIPMYPAA
LEGHGSIADM SYVCTSNP