Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_3343 |
Symbol | |
ID | 4458336 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 4096743 |
End bp | 4097699 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639704115 |
Product | glycosyl transferase family protein |
Protein accession | YP_847451 |
Protein GI | 116750764 |
COG category | [R] General function prediction only |
COG ID | [COG1216] Predicted glycosyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.178674 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGAAA TTGACGTCAG CGTTATCATC GTTGCGTGCA ATCGACCCCC GGAATTAGAA CGAGCATTGC GGTCATCGTT CGCCCAGACG GGGGTCAGTT TCGAGGTTTT CGTATTCGAT AACAGCACGG ATGGCCGTGT CGCTGCGTTG ATTTCCGAAA AATATCCCGA TGTAATCTAC ATGAAAGCAC CATCGAACAC GGGACCGTGC GTTGCGCGTA ATCGTTGCGC CGAGCATGCG GCGGGCGAAG TCCTGGTTTT CCTGGACGAC GATGCGTTCT TTACCGATAA CACCACCCTC AAGAAGGTAT CCTGTGCAAT AAGGGCGGCC GAGGATATTG GAGGCCTGGC GATGACCTTT GTCGAGCCTT TCAATCCGCG GAATAAGCTC GACAGTCCCT TGGCCGGGCG GGTTCCGCCC GAGGGAATGA AATCGTTCGT GGCGTGTGCC GCAGCCGTGC GGAAATCCGC TTTTTGTGAG GCTGGAAGCT TTCGTACCGC ATTGCTCATC GACGGTGAAG AGCGCGACCT CTGCGTTCGG CTTCTGCTGA AAGGGTATCG GATCGGGTAC GTCGCCGTTG GGCCGATTGT CCACTCCAAG AGTCCCATTC GAGACACTGG GAGCAGGGGT GTCCACGCAA TAGCCAACCA GATACTGTTT GACTACTGGT ATCTTCCCGG CCCGCTCGTC TTGCCGTCGA TTCTCCGTCA TGCGTGGAAG CTTCTGGTTT ACCGGTTCTC CTGGGAGAGC ATCCCTCCGA GATTGGAGGG AATCGCGCGA GGCATCGCTG GGTGCCTGCG CTTCCGTGAC CTCCGCATGC CGATGACCTT TACACAGTGG CGCTCTTATA TCAATCTTCC CCCTCACGGC GCCGAGCCCA TCCCCATGTA TCCAGCCGCC CTGGAAGGTC ATGGAAGCAT CGCAGATATG AGCTATGTGT GCACCTCGAA TCCCTGA
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Protein sequence | MAEIDVSVII VACNRPPELE RALRSSFAQT GVSFEVFVFD NSTDGRVAAL ISEKYPDVIY MKAPSNTGPC VARNRCAEHA AGEVLVFLDD DAFFTDNTTL KKVSCAIRAA EDIGGLAMTF VEPFNPRNKL DSPLAGRVPP EGMKSFVACA AAVRKSAFCE AGSFRTALLI DGEERDLCVR LLLKGYRIGY VAVGPIVHSK SPIRDTGSRG VHAIANQILF DYWYLPGPLV LPSILRHAWK LLVYRFSWES IPPRLEGIAR GIAGCLRFRD LRMPMTFTQW RSYINLPPHG AEPIPMYPAA LEGHGSIADM SYVCTSNP
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