Gene Sfum_3339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3339 
Symbol 
ID4458332 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4091470 
End bp4092138 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content64% 
IMG OID639704111 
Productmethyltransferase type 11 
Protein accessionYP_847447 
Protein GI116750760 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.52136 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTAGGA CGTTCACTGC CTTGGTTTTT CGCACACTGT ACAGGATGGC GACCATTGGT 
CTGGCCAAAG GGCCGCACGT CAGCCGGTAC ACCATGTACG CAAGGCTGGG AGCGCATCGG
CGCGAGAGGA GACCGGGCGA GCGGGCGCTC GCGGTCAGCG GATCGGAGGA TCTGGCCCGG
CTGCTGGGTT TCGGCCCGGA ACAGATCACC GATGCGTCGT ACCCGGAATG CAATATCCTC
GGTCTGCCGT TCGAGGACGA TCGGTTCGAG GCGGTCGTGA GCGACCAGGT TGTCGAGCAC
GTCGAAGGAG ACCCTTTCGC GGCGGTGGCG GAGAGTTTCC GCGTCGTGAA ACCGGGAGGG
CTGGTGGTGC ACACTTCCTG TTTCATGACC CCGGTTCACG GGTCGCCGGG CGATTTCTGG
CGGTTTACGC CCGAAGGGCT GGCGCTGCTG GTCAAACCGT TCGGAGACAT CATCGAGGCG
GACGCATGGG GAAACCCGTT GGTGCTTCTC TACGGCTTTC TCGGGCTGCG ACGCGAACCC
GTGCCCCATG CCGCCTGGCA CCCGGCGCAC CGGATCGCCG CCTGGAACGT GCGGTCCTGG
CCCATGAGCA CCTGGGTGGT GGCGAGAAAA CACGATCCGC TCGGACAGGC AACGGCATCG
AATGCGTAG
 
Protein sequence
MVRTFTALVF RTLYRMATIG LAKGPHVSRY TMYARLGAHR RERRPGERAL AVSGSEDLAR 
LLGFGPEQIT DASYPECNIL GLPFEDDRFE AVVSDQVVEH VEGDPFAAVA ESFRVVKPGG
LVVHTSCFMT PVHGSPGDFW RFTPEGLALL VKPFGDIIEA DAWGNPLVLL YGFLGLRREP
VPHAAWHPAH RIAAWNVRSW PMSTWVVARK HDPLGQATAS NA