Gene Sfum_3338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3338 
Symbol 
ID4458331 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4090230 
End bp4091477 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content67% 
IMG OID639704110 
Productglycosyl transferase, group 1 
Protein accessionYP_847446 
Protein GI116750759 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.620464 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTAGCA TCGCGGTCCT CTGGATGCGC TTTGGTCCCT ACCATCTCGC TCGCCTGCGA 
GGAGCGGCCG AACGTGCCGC GCGGGACGGC GCGGTCGTGC ACGGCATCGA AGTGGCGGGC
ATGGACCACT ACGGGTGGCG GCGGACGGAT GGAGCCGCCG ACTTTGCCCG GCACTGCCTC
TTTCCGGACC GGCACTACGA CGAACTGTCC GCCGGCGCGA TCGCCCGGGC CGTGGGTCTG
GAACTGGATA AGCTCCAGCC GGACGGCGTG GGCATCAACG GGTGGAGCGT CCCGGAAGCG
CGGGCGGCGC TTGCGTGGTG TCGAAAGAAC GGCAGGAGGG CGGTGGCCTT CTCGGAATCC
CTGCCGGGAA AGCCTCGGCC TCCTGTCTGG AAAGAATGGG TGAAATCCTG GATCGTGAGA
CGCTTCGACG CGGCGCTCGT CGGCGGGGCG CCTCACCGGG AATACGTCGT GAAGCTCGGC
ATGCCTGCCG AACGCGTGTT TCAAGGGTAT GACGTCGTCG ACAACGATTA TTTCCGCGCG
GCAGCGCAAG CGGTTCGCAC ATCGACGCCC ACACGGAAGG GCGGCATGCC GAAAGCGCGG
AATCCTTCCC CCGGGACCGA AACGGTCGTG TCCCGTGCAA CCGTCGATCA AGGAGAGCGC
GGCATGCCCG CGCCCTCTCC CGTGCATTTG CCTCATGCCG GGGACGGCCC GCTCTATTTC
TATGCAAACA CGCGCCTCAT CGCGCGCAAG AACATCGACG GACTGCTGCG GGCTTACGCA
TCGTACCGAA GAGAGTTCGC CGATCCCTGG GACCTCGTGG TGACGGGAAG CGGCGAGGAA
GAACCCCGGC TCAGGGCGCT CTGCTCGGAG CTCGCCCTGG ACGAGCACGT GCGGTGGCCG
GGTTTCGTCC AGTACGAGGA GCTGCCTCGA TATTACGGGC CGGCGGGAGC GTTTGTCCAC
CCGGCCAGGT CGGAGCCCTG GGGGCTCGTG GTGAACGAAG CCTGTGCCAG TGGGCTGCCC
GTGCTCGTGT CGCGGACGGT GGGCGCGGGT TTCGAGCTGG TTGAGGAAGG ACTCAACGGT
TTTCTGTTCG ATCCCTTCGA CGTCGGGGCC ATCTGCGCGG CGCTGGTGAG AATGAGCGAA
ATGACGCCGG GCGAGCGCGC GGACATGGGC GGGCAATCGT GGGAGATCGT CTCCCGGTGG
GGCCCGTCCC GTTTCGGAGA GGCCTTATGG GCCGCAATGA CCGCATGA
 
Protein sequence
MRSIAVLWMR FGPYHLARLR GAAERAARDG AVVHGIEVAG MDHYGWRRTD GAADFARHCL 
FPDRHYDELS AGAIARAVGL ELDKLQPDGV GINGWSVPEA RAALAWCRKN GRRAVAFSES
LPGKPRPPVW KEWVKSWIVR RFDAALVGGA PHREYVVKLG MPAERVFQGY DVVDNDYFRA
AAQAVRTSTP TRKGGMPKAR NPSPGTETVV SRATVDQGER GMPAPSPVHL PHAGDGPLYF
YANTRLIARK NIDGLLRAYA SYRREFADPW DLVVTGSGEE EPRLRALCSE LALDEHVRWP
GFVQYEELPR YYGPAGAFVH PARSEPWGLV VNEACASGLP VLVSRTVGAG FELVEEGLNG
FLFDPFDVGA ICAALVRMSE MTPGERADMG GQSWEIVSRW GPSRFGEALW AAMTA