| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3323 |
|---|
| Symbol | |
|---|
| ID | 4458351 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | + |
|---|
| Start bp | 4068302 |
|---|
| End bp | 4070233 |
|---|
| Gene Length | 1932 bp |
|---|
| Protein Length | 643 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 639704095 |
|---|
| Product | heat shock protein DnaJ domain-containing protein |
|---|
| Protein accession | YP_847431 |
|---|
| Protein GI | 116750744 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.429446 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.119258 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCCTT TTTCTATGCG CGGGCGCAAT GACGCTCTGG AAGTCCTGGT GCGGCTGCTC
GCGGGAGAAA AGAACTCACA CCGGCTTATT GCGAAAATCA CTTCCGATTC CGCTTTGCTC
AAGGAGGCCG AGCGGATTGA CGGCGCGATT CGCTCAAACT CCGCCTCGGA CGAAGAACGC
GATCGCTTGT CGAGGCTCTG CCGCCTGCAT CAGATACGCC CCGACCGTTT CAGTGCACGT
CTCCACCTGG TCCTTCATTC CCTCGGTTTG ACGTCTCCCG ACTTGAGCTG CTACGAAATC
CTGGGCGTTG AACCGAGCGC CGGCCGGGAT GAGATCAAGA AGGCCTTCAG GCAGCTCAGT
CTCAGGTATC ATCCCGATTT GAACCCGGGC GATACTGACA CGACCGAGAG CTTCAGGACA
ATTCGCAAAG CGTACGAGGT CCTCTCGGAC GAGAAGCGCC GGGAACGGTA CGATGCCGAG
TCGGCGATTC CCGGTTGGCT GGATGATCAG GCAGAGGAGG AGTTGAATGC CGTCGGCAAT
GGATGGTGGC TCAGGCAGCT CTGGCAGCTT GGAATTCCCG TCCTCATTCT GCTGCTGTTC
TGCTTTTGGG TCGATTATGA ATACCTGCTG ACCGACAGAT ATTACCGGGT GAAACAGGCG
GGCGAAGCAC GGGAGGATGA AAATCCGTTC TCGAGCGTCA AATCCGTCGA AATCGCAATT
AGAGAGGACG TCCCGTCTTC GGCGGAACCC GCGATTTCGG GAGAAACCCG GCCGAACGAC
ATTGCGGAAA CACCTCCTGC CGCGCAGCCG GATCACGGAT ACGACATCGC TCCAACCCGT
GAACCGGCGG TGATCGAGGA GCCGCCCGGC GATCTCGCGT CAAGGCGCGC AGCGGGTTTC
GAGCAGGATC GTGTCTTTCG GAAGACGGAC GCCGCGGCTG GGATCGTTCC CGGTGCGGGT
ACGCCGCCAT CATCGGACAA ACCGTCGGGT GACGGTGCGA ATGCGCCGGT TGCGGCGCCG
GCGGAGACGG TCGAATCCGG AAAGGCGGTG GATGCTTTCA GGGATGATGC GTACGGAGCC
CCGGAGCCGC CCGGTATTCC GCGGGATCTT GCGGAGTCGG CGTCACGGCG GGGTGAGACG
GAGACTCGCG CGGCACGAAT CGGTCCGGAG TCTGAAATCG GACCGAAGAA CGGGGAACAG
GGTTCGATGG GATTGCCGGA ACACGGCGAA ACCTTGCAAG AGCCCATTCC TGCGGAAACT
GCCGGTTCCG TGAAGCGAAA GGGGAAGACC GAAAGACAGG TGACGGGTGA GAAGACAAGG
GAGGGCAAAG GAGCGGAAAT CAAGCCGGTG AGGCAGGCGG AAGCGGGGAC CCGGGGAGTT
GCGGGCAAAA TGGAGGGCAG GGCCGTTCCC CAGATGGTCA AGGATGCGAA ACAGGTTGGA
AAACGCCGTC CGGGCGACCT GGGGGATACG AAGCGGCAGG CTTTGCCTGC GGACGCTCCG
CCGGGAACAA TCGAAAATCA TGCGCTCACG GACGCCCCCA TGCCGTCAAT CGACGAGATG
AGTATTCGGG CGCACGATTT TATCAGGCGG TATGTCGCGG CATACGAGAA CAGAAATCCT
ACCCGGTTGT TCGGTTTTTT TGAACCGAAC GCCGTTGAAA ACGGCAAGTC GCTCGATCAT
CTGTTCTCGA CGTACATCTC CAATTTCAAA CGGGCCGAAA AAATTCGTTA TCAAATCCAC
CCTGCCGACT TCAGGCTTGC CCGGGAGAAG ATGATCGTCA GCGGCAGCTT CGAGATGGCG
GTAAAGTTCA AGGGGGAACC CACCGTGGAA TCCAGGGGCT CGATCCTGAT GGAGCTGACC
ATGCACGATG ACGATTTCCG AATCAGGACT CTGACCTACA ACTTCTGGGA ATCCGTCAGG
CGATCCGACT GA
|
|---|
| Protein sequence | MPPFSMRGRN DALEVLVRLL AGEKNSHRLI AKITSDSALL KEAERIDGAI RSNSASDEER
DRLSRLCRLH QIRPDRFSAR LHLVLHSLGL TSPDLSCYEI LGVEPSAGRD EIKKAFRQLS
LRYHPDLNPG DTDTTESFRT IRKAYEVLSD EKRRERYDAE SAIPGWLDDQ AEEELNAVGN
GWWLRQLWQL GIPVLILLLF CFWVDYEYLL TDRYYRVKQA GEAREDENPF SSVKSVEIAI
REDVPSSAEP AISGETRPND IAETPPAAQP DHGYDIAPTR EPAVIEEPPG DLASRRAAGF
EQDRVFRKTD AAAGIVPGAG TPPSSDKPSG DGANAPVAAP AETVESGKAV DAFRDDAYGA
PEPPGIPRDL AESASRRGET ETRAARIGPE SEIGPKNGEQ GSMGLPEHGE TLQEPIPAET
AGSVKRKGKT ERQVTGEKTR EGKGAEIKPV RQAEAGTRGV AGKMEGRAVP QMVKDAKQVG
KRRPGDLGDT KRQALPADAP PGTIENHALT DAPMPSIDEM SIRAHDFIRR YVAAYENRNP
TRLFGFFEPN AVENGKSLDH LFSTYISNFK RAEKIRYQIH PADFRLAREK MIVSGSFEMA
VKFKGEPTVE SRGSILMELT MHDDDFRIRT LTYNFWESVR RSD
|
|---|
| |