Gene Sfum_3318 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3318 
Symbol 
ID4458346 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4060961 
End bp4062154 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content61% 
IMG OID639704090 
Productpeptidase M24 
Protein accessionYP_847426 
Protein GI116750739 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0006] Xaa-Pro aminopeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.971608 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.224866 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTTCAGG TCCCCGAAAG TGAAATTGCC GCCCGTTTGA GGATGTTTCA GGCACTGCTG 
TCGACGAGCG GGGTGGACGC GGCGGTTGTT CGACAGAACA CAGACCTGTA CTACTTCACC
GGCACCGTCC AGGACGCCCA CCTTATCGTG CCTGCTTCAG GGAAGCCGAT TTTCCTGGTG
AGGCGCGACG TGGATCGCGC GGAAAGCCTT TCGCCCATTC GCCCCGTGGT TCCTCTACAA
AGCCTGTCCG ATCTTCCTCC CGTGGTGGAA GCGGCCTGCA AGGGGTTTGT CCCGCGGCGA
CTGGGCATGG AACTGGACGT GCTTCCCGCG AATCTCCTGT TCATGTACAG GGAGAAACTG
TTTCCCGACC AGGAGATCGT CGATGTCAGT CTCCTGATCC GCCGGATACG GACGATCAAA
TCAAAGTGGG AACTGGAGAT GATGCGCTTG GCCGGCATCA TTTCGAAGGC AATTGCCGAT
GCGGTCCCCC AGGTACTTCG CGAAGGCATT TCGGAAGTGG AGCTGTCCGC CGAACTGCAA
ATGGTGGCGC ACAGGGCCGG ACACCTCGGC CTCGGCCGCT GCAGGACCTT CAACATGGAG
GTTGTGTTCG GACATCTCCT CTCGGGTCCG GAAGCCGCCA CGCCGTCCTA TTTCGATTCT
CCGACGGGAG GCGAGGGGTT CTCACCGGCC TTCGCGCAGG GTGCAAGCGA GAGGAGAATC
CGACCGGGCG AACTGGTCAG CGTCGATACC ATGGCCTGTT GGCACGGGTA CTTGAACGAC
CAGACCCGGG ACTATTCGCT TGGCGCTCCC CCTGCTCGAT TGCAGGAAGC ATACCGCCTG
TCCGCTCTGA TCCATCAACG GTTTCGACAA ACGGCGAAAC CCGGAGCCGT GACGGGAGAG
CTCCATGACG CGGTGTGGCA ATGGGTCAGG GAGGCGGGAT GGGATGAGTG GTTCATGGGA
ACCGGGGAGC AGCGGGCACC CTTCGTGGCG CACGGACTCG GGCTGGAGGT CGATGAGTTT
CCGCTCATCG CCCGGGGGCA GACCCTGGTT CTCCAGGAAG GCATGACCTT CGCCTTCGAG
CCCAAGTTCA TCCTGCCGGG GGAAGGGATC GCCGGCCTGG AAAATACCTA CGTCGTCAGG
CACGACGGGC TGGAATCGCT CAATCCCGCC TCGGAGGAAC TGCGCATATT GTGA
 
Protein sequence
MFQVPESEIA ARLRMFQALL STSGVDAAVV RQNTDLYYFT GTVQDAHLIV PASGKPIFLV 
RRDVDRAESL SPIRPVVPLQ SLSDLPPVVE AACKGFVPRR LGMELDVLPA NLLFMYREKL
FPDQEIVDVS LLIRRIRTIK SKWELEMMRL AGIISKAIAD AVPQVLREGI SEVELSAELQ
MVAHRAGHLG LGRCRTFNME VVFGHLLSGP EAATPSYFDS PTGGEGFSPA FAQGASERRI
RPGELVSVDT MACWHGYLND QTRDYSLGAP PARLQEAYRL SALIHQRFRQ TAKPGAVTGE
LHDAVWQWVR EAGWDEWFMG TGEQRAPFVA HGLGLEVDEF PLIARGQTLV LQEGMTFAFE
PKFILPGEGI AGLENTYVVR HDGLESLNPA SEELRIL