| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3317 |
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| Symbol | |
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| ID | 4458345 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 4059195 |
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| End bp | 4060775 |
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| Gene Length | 1581 bp |
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| Protein Length | 526 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639704089 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_847425 |
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| Protein GI | 116750738 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.135478 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGCGCC CTGAAACCAT GAACGACGCC TTCGAAGCAT CTCGATCGAA CAAGTGGGCC
ATCGCCTTGA CGGTGATGCT GCCGACCTTC ATCGAGGTGA TGGACACGAG CGTCGTCAAC
GTTTCGCTGC CGCACATCCA GGGCAGCCTG AATGCCGGCG TGGATGAGTC GACCTGGGTA
CTGACCTCCT ACCTGGTGTC CAACGCGATC ATCATTCCCA TAACGGGTTG GCTGGCAAGC
GTGTTCGGGC GCAAGCGCTA CCTGATCTTC TCCGTGGTCA TCTTCACGCT CAGCTCCCTG
TTTTGCGGCG CCGCGCCCTC CCTGGAAGTG CTGATTCTTT GCAGAATCCT GCAGGGGTTG
GGTGGAGGCG GGCTGCAGCC GCTGTCTCAG GCCATTCTGC TGGAATCGTT TTCTCCAAAG
GAGCACGGCA TCGCCATGGC GGCTTTCGGG ATGGGGGTTG TGCTGGCTCC CATACTGGGG
CCCGTTCTCG GGGGCTGGAT AACGGACAAC TGGAGCTGGC GGTGGGTGTT CTACATCAAC
CTTCCGGCGG GGATCCTGGC GCTATTCCTG GTGGTGCTCT TCATCCAGGA TCCGCCCTAT
CTGCGCCGAA CCCAGTTCAG AATGGACACC TGGGGGCTTT TTCTGTTGAC CGTCGGGCTC
GGTTGCCTGC AGATCGTTCT GGACAAGGGT GAACGCGAAG ACTGGTTCAA TTCGCATTTC
ATCGTGGTCC TCAGCATCGC TGCCGCGCTC TCGCTGGTTT TGTTCGTCAT CGTGGAACTC
AACGCCGAAC ATCCCGTGGT GAACCTCAGG GTCTTGCGAG ACCGGAGTTT CGCGGCCGGG
ACCGTTATCA TGTTTTTCGG ATTCTTCTGC CTGTTCGGGA GCATCGTGCT GTTGCCCCTC
TACCTGCAGC AACTCATGGG CTACACGGCG CTTTGGGCCG GGCTGGTGCT GGGACCGGGA
GGGTTCGCCA GCTTTTTCAT CATGCCCGTT GTCGGCGTTC TGCTTAAAAA AGGCGTGAAG
CCCCGGTACC TGCTGTCCAT CGGACTAGTG GCGACCGCTT TGTCCACGTG GATGATGTCC
GGTTTCAATC TCGAGGCGGA TTTCTACACC GTCGCATGGC CGCGCTTCGT GCAGGGATTC
GGGATGGGGC TGTTCTTCGT ACCCCTGGCC GCAGCGGCCT ATGTGAACAT TTCCAGGGAG
GAGATGGGGA ATGCGTCGGG CATCTTCAAC CTGTTGCGCA ACCTTGGGGG CAGCTTCGGC
GTGGCGTTCA GCACGACCGT GCTGTCACAG AGGTCGCAAT TGCACCAGAC GCATCTTTCG
GAGTACATTA CTCCCTTCAA TGCCGCCTTT CAGACCTACT TCGATCAGGT CTGCTCATGG
CTGCAGATGA ATCAGCCGCA GGCATCCTGC CCGACGGGGG GGCTTGTGAT GACCTACAGG
GAAGTTCTGC GCCAGGCCAG TATGCTGGCT TTCAACGATA CTTTTCTGTT GCTCGCCATC
GCCACCTTAA GCCTACTGGC GCTCATGCCG CTGCTCAAGA AATCCGCCAG GCCTTTCGGG
TGGAAGGAGG GCGTGCATTG A
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| Protein sequence | MRRPETMNDA FEASRSNKWA IALTVMLPTF IEVMDTSVVN VSLPHIQGSL NAGVDESTWV
LTSYLVSNAI IIPITGWLAS VFGRKRYLIF SVVIFTLSSL FCGAAPSLEV LILCRILQGL
GGGGLQPLSQ AILLESFSPK EHGIAMAAFG MGVVLAPILG PVLGGWITDN WSWRWVFYIN
LPAGILALFL VVLFIQDPPY LRRTQFRMDT WGLFLLTVGL GCLQIVLDKG EREDWFNSHF
IVVLSIAAAL SLVLFVIVEL NAEHPVVNLR VLRDRSFAAG TVIMFFGFFC LFGSIVLLPL
YLQQLMGYTA LWAGLVLGPG GFASFFIMPV VGVLLKKGVK PRYLLSIGLV ATALSTWMMS
GFNLEADFYT VAWPRFVQGF GMGLFFVPLA AAAYVNISRE EMGNASGIFN LLRNLGGSFG
VAFSTTVLSQ RSQLHQTHLS EYITPFNAAF QTYFDQVCSW LQMNQPQASC PTGGLVMTYR
EVLRQASMLA FNDTFLLLAI ATLSLLALMP LLKKSARPFG WKEGVH
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