| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3316 |
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| Symbol | |
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| ID | 4458344 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 4057937 |
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| End bp | 4059208 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639704088 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_847424 |
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| Protein GI | 116750737 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR00998] efflux pump membrane protein (multidrug resistance protein A) |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.226121 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGAAA ACCAGAATCC GGAAACGGAA TCCAAGCCCA ATCGAGTGCG CGCGAGGCGC
GTGAAAACGG CCGTGTGGGT GTGCGTTGTC GCCGGGTTGA TGAGTGGGGT TTACTGGTGG
CTGTTCATGC GCAACCGGGT TACGACCGAC GACGCCTATG CGAAGGTCGA TCCTGCCCCG
ATCAGTGCGA GAGTGCCCGG AACCGTGATC CGGGTTCTGG TCGAGAACGA CCGCCGGGTC
GAAGAGGGCC GGGTGCTGGT CGAGCTGGAT CCCACCGATT ATCGGGTCGC CGTCGAGAGG
GCGCAGGCCG CTCTGAACCA AAATGAAGCG GAGGTCCGGG CCGCGGAGAT TTCCGTCCCC
CTGACCGACG CCCAGACCTC AGGCCAGGCC CGGGCCGCCG AAGCGGCTCT CAAGGCGGCC
AGGGACGCGG AATCGCAAGC GCGGCACCGG CTTGGCGAGC TCAAGAACAC TCGTTCGGCC
GTGGCCGCCG ATCTCGCCCA GTTCCAGAGA GATTTCGAAC GTTTCGACAA CCTGTACAAG
ACGGGTGCAG GGACCCGGCG ACAGCAGGAA CAAGCCCTGA CGGCGCTCAG AAAGGCACAG
GCGCAACTGG CGGCAGCCGA TTCACAGATC CTGGCAACGG AAGCATCGCT GGCTGCTGCG
ACACAGCAGG TGGAGCGGGC GGGAGCCCAG TTTCAGGTGG CCCAGAGCGA CCGGGACAAC
GTCGAAATTC AGCAGTACAG GCTCGCCTCG CTCAGGGCGG GCAGAGACAA GAGCAGTGCC
GAGCTCGAGG CTGCCCGGCT GAATCTTTCC TACTGCACGA TCACGGCGCC CATCGACGGA
TTCATCGCGC AGAAGAGCGT CCAGGTCGGG GCGAGGGTCC AGCCGGGACA GCCCCTCATG
GCGGTGGTGC CTCTCCAGGA CATCTATGTC GAAGCGAACT ACAAGGAAAC CCAGCTGAAA
AACGTCCGTC TCGGTCAGCC GGCAAGCATC AGGGCGGACA TCTACCCCGG CTGGTCCTAC
ACCGGAAAGG TGGCGGGTAT CCGGGCGGGG ACGGGAGCGG CGTTTTCGCT GATTCCGGCC
GAGAACGCCA CCGGTAACTG GATCAAGGTG GTCCAGCGCG TTCCGGTCCG GATACTGCTG
GACGGACCGC CGCCCCGCGA CCATCCTTTG CGGCTTGGGC TGTCGCTGGT GGTGACCGTC
GATACCTCGG ACAGAAGCGG TCCCGTGCTG ATGGCGGATA CCGTGAAACC TCCCTCGAAT
GCGGCGCCCT GA
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| Protein sequence | MAENQNPETE SKPNRVRARR VKTAVWVCVV AGLMSGVYWW LFMRNRVTTD DAYAKVDPAP
ISARVPGTVI RVLVENDRRV EEGRVLVELD PTDYRVAVER AQAALNQNEA EVRAAEISVP
LTDAQTSGQA RAAEAALKAA RDAESQARHR LGELKNTRSA VAADLAQFQR DFERFDNLYK
TGAGTRRQQE QALTALRKAQ AQLAAADSQI LATEASLAAA TQQVERAGAQ FQVAQSDRDN
VEIQQYRLAS LRAGRDKSSA ELEAARLNLS YCTITAPIDG FIAQKSVQVG ARVQPGQPLM
AVVPLQDIYV EANYKETQLK NVRLGQPASI RADIYPGWSY TGKVAGIRAG TGAAFSLIPA
ENATGNWIKV VQRVPVRILL DGPPPRDHPL RLGLSLVVTV DTSDRSGPVL MADTVKPPSN
AAP
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