Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_3314 |
Symbol | |
ID | 4458342 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 4054570 |
End bp | 4056573 |
Gene Length | 2004 bp |
Protein Length | 667 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639704086 |
Product | ABC transporter related |
Protein accession | YP_847422 |
Protein GI | 116750735 |
COG category | [R] General function prediction only |
COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.433886 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTGTCCG TCCACGCTGT TGCAAAGTTC ATCGGCGACA GGAAGCTCTT CGCCGACGTT TCCTTTTCCA CCCTCCCCGG TGAAAGGATC GGCCTGATCG GTCTCAACGG GACGGGAAAG TCAACCCTTT TCCGCATCCT GCTTGGAGAG ATGCCCCCGG ACGCCGGTTC CGTGGTCCGG AGCCGGGGAC TCACCATCGG GCATCTGCCG CAACAGGTTG TGCCGACAAA GGACAAGACC GTTCTCGAAT ACGCCATGGA CGTGCACGAG CAGCTGCACG ACCTCGAATC CGAGATGCAC GCCATCGGCC GAGCGATGGA TATGGAAACG GACCCCGAAC GCAGCCGGGA ATTGGCTTTG CGGCACGCAC ACGTCAACGA GCAACTGGAG CGCCTCGGGG GCTACGACCT CGAGGCCCGG GCGGCCAAAA TCCTGGCCGG CCTGGGCTTT CGAGATTCTC GCTTCGGCAC GGCGGTTTCG ACGTTGAGCG GCGGGTGGAT CATGCGACTG GAAATCGCCC GACTGCTCTT GTCCGGCCCG GAGCTTCTGC TGCTGGACGA ACCGACCAAC CACCTCGACC TCATGTCTTT GCTGTGGCTG GAAGACTATC TTCTCTCGAC CACTTCGGCG ATGCTCATCG TTTCCCATGA CCGTTCCTTT CTGAACAGGC TGGTGACCAG GGTACTCGAG CTCGAGCAGG GCCGTCTCCA CGAGTACGCC GGAAACTACG ATGCCTACCT GGAGGAAAAG GCACGCCGGC GCGAGGTCCA ACTGGCCTCT TATCAAAATC AGCAGGATCG CATCCGTCAG GCCGAACGTT TCATCGAACG AAACCGCTAT CGGAAATCCA CGGCAAGCCG CGCGCAAAGT CGACTCAAGG TGCTGGAGAA GATGGAAAGG ATCGAAGCCC CAGTGTCTCG GGGGGCCGAA ATCCATTTCA CCTTTCCCGC CCCGGCGCGG TCCGGCAAAC GCGTTCTGGA GCTGCATCAG GCGCGCAAGG CCTACGGAGC GCACCTCGTT TACTCCGACC TCGAGCTGGT TCTCGAAAAG GGAGACCGCA TCGCGTTCAT CGGCGAAAAC GGAGCGGGCA AGAGCACGCT TCTCAAGATG TTGGCCGGGG CGGAACCCCT GTCGGGCGGA GAACGTATCG TCGGGCACAA CGCTTTCATC GGCTACTACG CACAGCATCA ATGGGAGCAG TTGCGCCCCG AATGCACCGT GCTCGAAGAA GCCGCTTCGG TTTCAGGCGA CATCCCCGCC TCTCAGCTCC GGGGGCTCCT GGGCGCCTTT CTTTTCCACG GTGAGGACGT TCATAAGAGA GTATCGATTC TGAGCGGCGG CGAGAAAGCG CGTCTCATTC TCTGCCGGCT GCTTCTTCAG CGGCCCAACG TGCTGCTCAT GGACGAACCC ACCAACCACC TGGATATCCC GGCGCGCGAA GTCCTCGAGG GGGCCCTGCG GGAATACCGG GGCACCATCT GTTTTATCAG CCACGACCGG CGGTTCATCA ACAACATCGC AAACAGGATC CTGGTTGTCG AACGAGGCAG AATCCACATT TTCCCTGGCA ATTATGACGA TTACCGTGAC ATATGGAGCA AGCGTCTCGA AGACGACCGG TTGCGGGAGG ACGCGGCAGC GACTGCGGGA GAGGGTGAAA ACCGGCGGCA GAGCGGCTCC GCCCGCAAGG AGCAGGACAG GCGCCGTATT GAAGCCCGGT GGCGAAATGA GCTCTATCAG GCAAAGCGGC CCCTGCAGGA GCGCTTGGAG CGGGTGGAGG CCGAACTGCA ACAGGCGCAT CGGGATCTGG ACGCCTTCAA CCAACTGCTG GCCGCGCCCG ATACGTACCG TGACGGCGCC AGGGTCCAGG ATTTGCACAA GGACTACAAG TCCTGCCAGG CCAGGATCGC AGAGCTCACG CAGGTCTGGG AAGAAAACGC CCTGATGCTG GAAGAAATCG AGGAGAACTT CTGGAAAGCC AGAGCGCACA ACGGCCCGGG TTGA
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Protein sequence | MLSVHAVAKF IGDRKLFADV SFSTLPGERI GLIGLNGTGK STLFRILLGE MPPDAGSVVR SRGLTIGHLP QQVVPTKDKT VLEYAMDVHE QLHDLESEMH AIGRAMDMET DPERSRELAL RHAHVNEQLE RLGGYDLEAR AAKILAGLGF RDSRFGTAVS TLSGGWIMRL EIARLLLSGP ELLLLDEPTN HLDLMSLLWL EDYLLSTTSA MLIVSHDRSF LNRLVTRVLE LEQGRLHEYA GNYDAYLEEK ARRREVQLAS YQNQQDRIRQ AERFIERNRY RKSTASRAQS RLKVLEKMER IEAPVSRGAE IHFTFPAPAR SGKRVLELHQ ARKAYGAHLV YSDLELVLEK GDRIAFIGEN GAGKSTLLKM LAGAEPLSGG ERIVGHNAFI GYYAQHQWEQ LRPECTVLEE AASVSGDIPA SQLRGLLGAF LFHGEDVHKR VSILSGGEKA RLILCRLLLQ RPNVLLMDEP TNHLDIPARE VLEGALREYR GTICFISHDR RFINNIANRI LVVERGRIHI FPGNYDDYRD IWSKRLEDDR LREDAAATAG EGENRRQSGS ARKEQDRRRI EARWRNELYQ AKRPLQERLE RVEAELQQAH RDLDAFNQLL AAPDTYRDGA RVQDLHKDYK SCQARIAELT QVWEENALML EEIEENFWKA RAHNGPG
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