| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3310 |
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| Symbol | |
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| ID | 4458373 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 4050230 |
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| End bp | 4050907 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639704082 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_847418 |
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| Protein GI | 116750731 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.365778 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCGGGTG CCGGGATATT GCCGGAAGCT CGAATGGATA CGGCCGGAAG GGGTGGCCGG
TTTGATTCGG CGAGGCTTAT CCGTGCGCCC GGGGGCAGGC GGACAATCCC GGAGAGGTCA
ATGCCCGCGA TGTCGGCTCG CCCGTGTGCT CGGAGCAGGC GAGGCGCAGA GCAATATCGA
GTATGCGTTC GGGCGGCTCA TCCATGCGAA CGGAAGTTGG CGGGGAATCG TATGGGGGGC
GGAGAAAAAA TGCCGGAGGC GCGAGCGAAG GGGGGTACCA TGAGGGGTGG TGGAATTCTG
TTGTTGATCG GGTTTGTTGT TCTCCTGACG GGCTGTGCCG GCTTATCCGC CGACATGAGA
TTGTCCAACC GGGGATACGA GGACATACTG AGCCGGAACT ACACCCAGGC TGAAAAACAC
TTGGCGGAAG CCCTTGCCAT CAATCCGGAC AATCCGTATG CGCTCATCAA CATGGGCGTC
GTCTATGAAA ACACCGGTCG AGAAGCACAG GCGCGGGAGA TGTATGAAAA GGCGCGGGCA
CTCGGTTCCC GCGAGGTCCC TTCCAGGACC AGCCAGGATT GGGCTAAGGA CAAATCTCTT
GCCGAAATCG CCGAAAAGGA TGCCGGCGGC CTGTCCACGA ACCAAAAGCC CCTTGCCAAA
CGAGGCGCAA GCATGTGA
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| Protein sequence | MPGAGILPEA RMDTAGRGGR FDSARLIRAP GGRRTIPERS MPAMSARPCA RSRRGAEQYR
VCVRAAHPCE RKLAGNRMGG GEKMPEARAK GGTMRGGGIL LLIGFVVLLT GCAGLSADMR
LSNRGYEDIL SRNYTQAEKH LAEALAINPD NPYALINMGV VYENTGREAQ AREMYEKARA
LGSREVPSRT SQDWAKDKSL AEIAEKDAGG LSTNQKPLAK RGASM
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