Gene Sfum_3305 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3305 
Symbol 
ID4458368 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4047202 
End bp4047945 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content63% 
IMG OID639704077 
ProductCDP-alcohol phosphatidyltransferase 
Protein accessionYP_847413 
Protein GI116750726 
COG category[I] Lipid transport and metabolism 
COG ID[COG0558] Phosphatidylglycerophosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.856293 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGACA CAGGACAACC CATTGATATC CCCGATCGTT TTCCGAACGA CTGGAAAACG 
AAGCCCACGG ATCGGTTCAT CCTGAAGTGG ATCAAGTGCA ATCTCTCGGC TCGAATCACC
CCCCGCCTGC TGGGCTTGCG GGGATTGCGG CCCTGGATGA TCACTCTTGC CGCGAGCGGT
CTGGGGACGA TGGCGGGCGC CGTCTTTGCG TTCGGACCCG CGTGGGCGGC GAGCGCGATG
GCCGCGTGCG CACAGGTGCT CGACGGGGTT GACGGCCAGT TCGCGCGGTT GACCAACGCC
CAGAGCAAAG CGGGGGCTTT CTGGGATTCA GTGCTGGACC GGTATGCGGA CGGGGCGCTG
GTGATCGGCC TCACCGTGTG GATCGGGCGA AATGTTGAGG CCGTTCCCTA TTGGTTGTTG
GGGCTGCTGG GATTTCTTGC CGTTGTCGGA AGCGGGCTCA TCAGTTATTC GACCGCTCGG
GCCGAATGCC TGGCGGTGGA GCTGGGGAGA CCGACCCTGG CGAGCAAAGG CACCCGGACC
TTTGTCGTGG TCGTATGTGG TTTTCTGACG GTCTTTTCGT GTTATGCCGC GGTGATCGCT
CTGCTCTACC TGGCGATTCA CACGAACCTG GTGATCGTCG GCCGACTGAA ACGCGCTCAC
GGATCGGCCG GCGACGGGGC TTCGCAATCC ACCCGGGACC CCGGGGCCCG TCGCGGGGGC
TTTCCATCTC GATCCGGAGT TTGA
 
Protein sequence
MNDTGQPIDI PDRFPNDWKT KPTDRFILKW IKCNLSARIT PRLLGLRGLR PWMITLAASG 
LGTMAGAVFA FGPAWAASAM AACAQVLDGV DGQFARLTNA QSKAGAFWDS VLDRYADGAL
VIGLTVWIGR NVEAVPYWLL GLLGFLAVVG SGLISYSTAR AECLAVELGR PTLASKGTRT
FVVVVCGFLT VFSCYAAVIA LLYLAIHTNL VIVGRLKRAH GSAGDGASQS TRDPGARRGG
FPSRSGV