Gene Sfum_3281 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3281 
Symbol 
ID4458379 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4019680 
End bp4020468 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content60% 
IMG OID639704053 
ProductABC transporter related 
Protein accessionYP_847389 
Protein GI116750702 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1119] ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.121617 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGAAT GGATTTCACT CAATGAAGTG TCCTTTGTGC GAAGCCGCCG GACGATCCTG 
GACGGCATCG ACTGGAACAT TTCCCCCGGG GACAACTGGG TCGTTCTCGG GGCGAACGGC
TCGGGGAAAA CCACGCTCCT TCGCCTTCTG GCGGGGTACC TGTGGCCCAC GCAAGGCCGG
ATAACCGTCC TCGGAGAACG ATTCGGTCAG ACGGATCTGC GTGAATTGAG AATGAAAATC
GGATGGGTCG GTTCCTTCCT CGAAGCCCAG ATCCCTTCCG GTCAAGCCCC CCTGGACCTG
ATCGTCAGCG GCAAGTTCGC GTCCATCGGC ATCTTCCAGA CTCCTGCCGA AGACGACTAT
CGGAAAGCAC GCGAGCTTGC GAAACGGCTG GGCTGTGAGA GAATCATCGA TCTCCCGTAC
GGGGTCCTGT CTCAGGGAGA AAAGCAGCGG CTGCTCATCG CCCGAGCCAT GATCCACCGC
CCTCAGCTGC TCATCCTCGA TGAACCGTGC GCCGGCCTGG ACCTGGTGTC CAGGGAACAG
CTGCTCCGGA CGCTCCAGGC CCTCGGCGAA GCCCCGGATG CCCCCTGCAT GGTCCTCGTC
ACGCATCACC TCCAGGAGAT CATGCCGGCC TTCACGCATG TGTTCCTCTT GAAAGACGGC
CGCCGCCTGG CATCCGGAAC AAAGGAAGAG ATTTTGAGAT CGGAGCTTCT GAGCGAAACC
TTCGGCATTG CCGTAGAGGT GGTTGCAGAA AACGGGCGAT ACTGGACGAA GGTTTCATTC
ACGGGATAG
 
Protein sequence
MDEWISLNEV SFVRSRRTIL DGIDWNISPG DNWVVLGANG SGKTTLLRLL AGYLWPTQGR 
ITVLGERFGQ TDLRELRMKI GWVGSFLEAQ IPSGQAPLDL IVSGKFASIG IFQTPAEDDY
RKARELAKRL GCERIIDLPY GVLSQGEKQR LLIARAMIHR PQLLILDEPC AGLDLVSREQ
LLRTLQALGE APDAPCMVLV THHLQEIMPA FTHVFLLKDG RRLASGTKEE ILRSELLSET
FGIAVEVVAE NGRYWTKVSF TG