Gene Sfum_3272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3272 
Symbol 
ID4458405 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4010290 
End bp4010898 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content63% 
IMG OID639704044 
Productmethyltransferase type 11 
Protein accessionYP_847380 
Protein GI116750693 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.554198 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTGA ATTGGGCGGA ACGCCTGGTC GTGAACAATC CGTTGCGGGT GATCGAGCAG 
CGGTTTCAGA TCAGGCGGCT GCGGAAGGCG GGGGTCCTGG AACCCGGGGC CAGAGTGCTC
GAGATCGGGT GTGGTCGAGG CGCCGGCGCC GACTTGATCC TCGATGCTTT TCAGCCCGAA
ATGGTTTTCG CCATGGACCT CGACGAACGG ATGATCCGCA AGGCACGGAC CTACCTGTCG
CCGGCCAGGC GGTCCCGGGT GGCCATGTAT GCCGGAGACG CCGTCGACCT GCCGCACCGG
AACGGCTCCA TGGACGCCGT GTTCGGATTC GGCGTGCTCC ATCACATCCC CGACTGGCAG
CGGGGGCTCG CCGAGGTGGC CAGAGTGCTC AGACCCGGCG GCGTTTACTT CCTCGAGGAA
ATCTACCCGT TCCTCTACCA GAATCCCGTC ACGAAGCACA TCCTTCTCCA CCCCGCCGGG
AATCGTTTCC GCAGCGCCGA TCTCCACCAA GCCTTAGAGG AGGCCGGTTT TTCCCTGATC
GACTCCCTGG AAGTGAAGTT CGCCTGGGTC CTCGCCGTAC TGGTGAAAAG AGGGCCTGCG
GAGGCCTGA
 
Protein sequence
MKLNWAERLV VNNPLRVIEQ RFQIRRLRKA GVLEPGARVL EIGCGRGAGA DLILDAFQPE 
MVFAMDLDER MIRKARTYLS PARRSRVAMY AGDAVDLPHR NGSMDAVFGF GVLHHIPDWQ
RGLAEVARVL RPGGVYFLEE IYPFLYQNPV TKHILLHPAG NRFRSADLHQ ALEEAGFSLI
DSLEVKFAWV LAVLVKRGPA EA