Gene Sfum_3265 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3265 
Symbol 
ID4458398 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3999971 
End bp4001230 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content58% 
IMG OID639704037 
ProductGlu/Leu/Phe/Val dehydrogenase, C terminal 
Protein accessionYP_847373 
Protein GI116750686 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0334] Glutamate dehydrogenase/leucine dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGGCA CCGACAATCA CAGTAATCCG TTCAAGATAG CTCAGAAGCA GATCAATGAC 
TGCGCGGATG TGCTCAAGCT CGGGCAAAGT ACCCGGGAAG TGCTCCTGCG CCCCATGCGC
GAGTTCCACG TGAATTTCCC CGTCCGCATG GACGACGGCA CGACGAAGCT GTTCCAGGGC
TTCCGAGTCC AATACAATGA CGCCAAGGGT CCCACCAAGG GCGGCATCCG GTTCCATCCC
GAAGAGACCG TGGACACGGT TCGGGCACTC GCCGCATGGA TGACCTGGAA ATGTGCCCTG
CTGGACCTGC CCCTGGGCGG TGCAAAAGGG GGAGTGATCT GCAACCCGAA GGAGCTCTCG
CAATTCGAGC TCGAGCGCAT AAGCCGGAGC TACATAAAGG CCGTCGGTGC CTTCATCGGG
CCGGACAAGG ACATACCCGC TCCCGACGTC TATACCAATC CGCAAATCAT GGCGTGGATG
GTTGATGAGT ACTCGTCCAT CATCGGAAAG AACCAATTTG GTGTCATCAC GGGCAAACCC
CTCTCTCTGG GGGGGTCTCC CGGACGAGGG GATGCTACGG CCAGGGGCGG CATGTACACG
CTTCGAGAAG CGGCCCGTCG TGTAGGCCTG GACTTGAGCA AGGCGACCAT GGCCATCCAG
GGATACGGCA ATGCGGGATC CTACGCGGCA AGCCTTGCTC AATCCATGTT CGGCATCAAG
GTTGTGGCGG TTTGCGACTC GAAGGGCGCC GTCACCTGCG AGAACGGCAT CTGCGCCGAT
ACGGTGGACG CGCACAAGAG AAAGACGTCA TCCGTCCTGA ACTGCGAGGG TACGCGGAAC
ATGACAAACG ACGAGCTCTT GGCGCTGGAT GTGGACGTGC TGGTACTGGC CGCCCTTGAG
AACACCATCA CCGAGCGGAA CGTTGACAAG GTGAAAGCCA AGATACTCGT CGAATTGGCC
AACGGGCCGA CCACCCCCGA CGCCGATGAG GTCCTCTATC GCAAGGGAAT ACACGTCATC
CCGGACTTCC TGTGCAACGC CGGAGGCGTC ACCGTTTCCT ATTTTGAAAT GGTTCAGAAT
GCCTACATGT ATTACTGGGA TGAGGCGGAA GTCCATGAAA AGCTGGACAA AAGGATGACG
AAGGCGTATC ATGAGGTTGT TGAATTGTCG GAAAAATACA AGATCAACAT GCGCAAAGCC
GCATACGCGG TTGCGGTTGC AAGGGTTGTC GAAGCCATGA AATTGCGTGG TTGGGTATAG
 
Protein sequence
MAGTDNHSNP FKIAQKQIND CADVLKLGQS TREVLLRPMR EFHVNFPVRM DDGTTKLFQG 
FRVQYNDAKG PTKGGIRFHP EETVDTVRAL AAWMTWKCAL LDLPLGGAKG GVICNPKELS
QFELERISRS YIKAVGAFIG PDKDIPAPDV YTNPQIMAWM VDEYSSIIGK NQFGVITGKP
LSLGGSPGRG DATARGGMYT LREAARRVGL DLSKATMAIQ GYGNAGSYAA SLAQSMFGIK
VVAVCDSKGA VTCENGICAD TVDAHKRKTS SVLNCEGTRN MTNDELLALD VDVLVLAALE
NTITERNVDK VKAKILVELA NGPTTPDADE VLYRKGIHVI PDFLCNAGGV TVSYFEMVQN
AYMYYWDEAE VHEKLDKRMT KAYHEVVELS EKYKINMRKA AYAVAVARVV EAMKLRGWV