| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3264 |
|---|
| Symbol | |
|---|
| ID | 4458397 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | - |
|---|
| Start bp | 3997005 |
|---|
| End bp | 3999695 |
|---|
| Gene Length | 2691 bp |
|---|
| Protein Length | 896 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 639704036 |
|---|
| Product | phosphoenolpyruvate synthase |
|---|
| Protein accession | YP_847372 |
|---|
| Protein GI | 116750685 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0574] Phosphoenolpyruvate synthase/pyruvate phosphate dikinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.882195 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCAATCGG ATGTCGTGAG CAGCGGGATC TCCGCACTGA ACGGGATCCT GCAGGGGTTG
CGCCTGGGGG ACAATGTGGT GTGGCAGGTG GACGGAATGG ACACCTACCA GCACGTGGTG
CATCCCTTTG TGAGCCAGGC CGTCCAGGAC CGTCGCACCG TCGTGTATGT CCGCTTCGGC
GCGCGTCGAA GCATTCTCCG TCCAGAGGCC GGAGTCGGCT GCGAAGACGT CGATCCGAGA
CACGGTTTTG ATTCGTTCAG CGCCCAGGTC AACGGAATCA TCGAGAAGAA AGGCACGGGC
GTCTTCTATG TGTTCGACAA TCTCTCCGAG CTGGTGGCGG AATGGGCCAC CGACGAGCTC
CTGGCAAACT TCTTCCAGGT GACGTGCCCC TATCTTCATG AGCTGGACAC GGTCGCGTAT
TTCGCCCTCA CACGCGGACG GCACTCCCAC CGCGCAGTCG CAAGGATCCG GGATACCACT
CAAGTTCTGA TCGATCTTTA CCATGTCAAG GAAAATCTCT ATATCCATCC GCTCAAGGTC
TGGGATCGTT ACTCCTCACA GATGTTCCTG CCCCACTTGT TCACCGAAGG CGTTCTCACT
CCCGTCTTTC ACAGCGGTGA CGCATCGGCC ATATCGCTCA CCGCCGGGGT TCCGCCCCTT
CGCGTCAAGG CGGATTCCAT CGCGCCGTGG GACAGCGTTC ACAGGAAGCT CTCCCAGTAC
GACGAAAACG AATTGAAACA ACTGGAGGGC ACACCGGAAA TCCAGGCCCT GAAACAGGAA
CTCTCGCAGA TGATCATCGG GGCCGATCCG GAACACAAGC GCCTGTCGGA TGAATACCTC
ACGCTGCAGG AACTGCTGGA GGTCAGAGAC AGGCTGATCG GCTCCGGTCG AATCGGCGGG
AAAGCGGCAG GAATGCTCCT CGCCCGGGGT ATCCTCCGCA AAGCTTCCGG CGACGTGAAT
TTCTCCGAGG TCCTCGAAGA ACACGATTCG TTTTACATCG GCTCGGATGT CTTTTTCACA
TTTCTCATCA ATAACGGTCT CTTTCGCTTG AGGTTACGCC TGACCCGGGA TTCACAGATT
TCCACCGAGG AATTCGAACA GGTCGAAAAC CGTTTCCTTG AAGGCGAATT CCCCGGCGAG
ATCATGGATC AGTTCAAAGA CCTCATCGAG TATTTCGGTC AAGCCCCGAT CATCGTCCGA
TCGAGCAGCC TGCTCGAGGA TGGTTTCGGA AATGCTTTCG CGGGCAAATA CCGTAGCGAA
TTCTGCGTGA ACCAGGGAAG CCCCGAGGTG AGGCTGGAGG CTTTCCTGCG GGCGGTCAAG
CTCGTCTATG CAAGCGCCGT CAATCCGGAT GCCCTTGCAT ACCGAAGGCA GCGGGGCCTC
GGGGAGTCCG ACGAGCAGAT GGCAATCCTC GTTCAGCGTG TTTCGGGAAT GCGCTACGAC
GGCTTCTTCT TCCCCTCGCT TGCGGGCGTG GCGTTTTCTT ACAACCTGTA CCGGTGGACG
AATCGCATCG ATCCCCATCA GGGGATCATC AGGCTTGTTT TCGGCCTCGG CACGCGGGCG
GTCAACCGGG AGGGCGGCGA CTACCCCCGT TTGATTGCCG TGAGCCACCC GCTCCTTCGC
CCTGAAATCG GGTCGAAGAT CGCATTCTAC TCACAACACG AGATAGACCT GCTGGACCTT
GAACGCAACG AATTCAGGAG CGTTCCCCTG ATCGAAATCG CGCAGCGGGA CAACTACCCG
AATCTTGCTC TCTACGTGTC CGTCAACGAG GACGGATATA TGAGCGACCC TGAGGGCAGT
CACATCAGGA ACCCGGAAAA ATGCATCCTG ACCTTCAACA ATCTCCTCGG ACGCACCGGA
TTCATAAAAG TCATGAAGGA GCTTCTGGCT ACGCTCGAAT CGGCCTACGG ACATCCCGTC
GACACGGAAT TCACCGCCTC TCCGGGTTCG AGCGGGGATC TGCGGCTGAA CATCGTGCAG
TGCCGTCCCA TGCGAATACC GGGATCGGCC GAAGACGTGG TCTTGCCGTC CAGGGTCCCG
AAAGAACTCC TTCTGTTCAG AACGAACCGC GCTATCTCGG GAGGCGAGGT CAGAGACATG
AAGTACATCG TTTATGTGGA CCCGACCGCC TATGCCGTGC GCGCTCCCAT GGAAATCCGG
CAGGGGATCG GCCGCATTGT CGGAGAGCTC AACAGGCATC CGGATATTGC CCGGAACCGG
GTGATGATGA TGGGACCCGG CCGATGGGGC AGCTCGAACA TCATGTTGGG CGTCAACACG
ACCTACGCGG ATATCAACAA CGCCTCCGTC CTCGTGGAGA TAGCCCGCGT GGAAGACGGC
CACGTACCGG ACGTGTCCTA CGGGACTCAC TTCTTTCTCG ACCTCGTCGA ATCCCGCGTT
ATCTACCTGC CCCTGTATCC GGACGAACCG GAAGCGGACT TCAATTTCTC TTTTTTCGAG
AACTCCCCGA ACAGCCTTGC GCAATTTCTC CAGGGGGCGG AAAAATTCGA ACCGTTCATC
AAAGTGATCG ATGTCTTTCT CGCCGGTGGG AAGCGCTGTG CCCACGTCCT CGCCGATGCC
CGCAAAGGCG CGGCGGTATG CTTTCTCCGC GCCGCCTACA ACACCCCGAA GGAGGAATCC
GGTCTTCACG CCGGGTCTAC GGCGGTCACC GTGGCAAAAC CGAGCGCTTG A
|
|---|
| Protein sequence | MQSDVVSSGI SALNGILQGL RLGDNVVWQV DGMDTYQHVV HPFVSQAVQD RRTVVYVRFG
ARRSILRPEA GVGCEDVDPR HGFDSFSAQV NGIIEKKGTG VFYVFDNLSE LVAEWATDEL
LANFFQVTCP YLHELDTVAY FALTRGRHSH RAVARIRDTT QVLIDLYHVK ENLYIHPLKV
WDRYSSQMFL PHLFTEGVLT PVFHSGDASA ISLTAGVPPL RVKADSIAPW DSVHRKLSQY
DENELKQLEG TPEIQALKQE LSQMIIGADP EHKRLSDEYL TLQELLEVRD RLIGSGRIGG
KAAGMLLARG ILRKASGDVN FSEVLEEHDS FYIGSDVFFT FLINNGLFRL RLRLTRDSQI
STEEFEQVEN RFLEGEFPGE IMDQFKDLIE YFGQAPIIVR SSSLLEDGFG NAFAGKYRSE
FCVNQGSPEV RLEAFLRAVK LVYASAVNPD ALAYRRQRGL GESDEQMAIL VQRVSGMRYD
GFFFPSLAGV AFSYNLYRWT NRIDPHQGII RLVFGLGTRA VNREGGDYPR LIAVSHPLLR
PEIGSKIAFY SQHEIDLLDL ERNEFRSVPL IEIAQRDNYP NLALYVSVNE DGYMSDPEGS
HIRNPEKCIL TFNNLLGRTG FIKVMKELLA TLESAYGHPV DTEFTASPGS SGDLRLNIVQ
CRPMRIPGSA EDVVLPSRVP KELLLFRTNR AISGGEVRDM KYIVYVDPTA YAVRAPMEIR
QGIGRIVGEL NRHPDIARNR VMMMGPGRWG SSNIMLGVNT TYADINNASV LVEIARVEDG
HVPDVSYGTH FFLDLVESRV IYLPLYPDEP EADFNFSFFE NSPNSLAQFL QGAEKFEPFI
KVIDVFLAGG KRCAHVLADA RKGAAVCFLR AAYNTPKEES GLHAGSTAVT VAKPSA
|
|---|
| |