Gene Sfum_3263 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3263 
Symbol 
ID4458396 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3996341 
End bp3997030 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content62% 
IMG OID639704035 
Productmethyltransferase type 11 
Protein accessionYP_847371 
Protein GI116750684 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTCTCGC CCGCGCGAAG AATACTCAAG TGTTTTCACC CCGAAGGCAT CCCATGGCCC 
GGGGCCGTTT TGTACGACAT GGTCGGTAAA ACCGCCGTCT TCCAATACGG CTACCGGCTG
CTGGCCGCGG ACATCCTGCT CTGCTGCCCC GAGGGCGAGA TCCTGGACGT GGGGACGGGG
CCGGGACGGC TTCTGCCGGA GCTTGCGCGG CTGAATCCGA GACTGCGGCT GACCGGCCTC
GACATCTCGC GCGCCATGGT CTCCGTAGCC AGAGAAAACA TGGCGCAGGC AGGCTTTGGC
GAAACGATTT CCATCGTGGA AGCCGCGGCG AACCACGTGC CGTTTCCGGA CGGCAGATTC
GATGCGGTGG TGAGTACGGG GAGCATGCAC CACTGGAAGG ATCCCGTGGG GGCATTGAAC
GAAATCCATC GCGTCTTGAA GCACGGGGGA TATGCTCTGA TCTACGATCT TGCAGCCGAC
ACGCCGGAAG CTGTTCTGAA GGACGTGAGC CGCCGGTTCG GCCGCCTGAG AACGATGCTC
CTGTGGCTCC ACACCTTTGA GGAGCCTTTC TATGGTTCCA GGGAGCTTGA GGAACTGGCC
GCCTCCTCGC TGTTCGGCCG GGGACGGACG CGATTCGCCG GCATGCTGTG TTGCCTGATG
ATGGTCAAGC GCTCGGTTTT GCCACGGTGA
 
Protein sequence
MLSPARRILK CFHPEGIPWP GAVLYDMVGK TAVFQYGYRL LAADILLCCP EGEILDVGTG 
PGRLLPELAR LNPRLRLTGL DISRAMVSVA RENMAQAGFG ETISIVEAAA NHVPFPDGRF
DAVVSTGSMH HWKDPVGALN EIHRVLKHGG YALIYDLAAD TPEAVLKDVS RRFGRLRTML
LWLHTFEEPF YGSRELEELA ASSLFGRGRT RFAGMLCCLM MVKRSVLPR