Gene Sfum_3258 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3258 
Symbol 
ID4458426 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3990949 
End bp3992061 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content61% 
IMG OID639704030 
Productcobalamin B12-binding domain-containing protein 
Protein accessionYP_847366 
Protein GI116750679 
COG category[R] General function prediction only 
COG ID[COG5012] Predicted cobalamin binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAACC GAATCATCTC GGAAGCGAAG ACGTTGACTC ACATGCCGCT TGAAGCGGCG 
ACCGTTTACG ACACCTTCAA GGGGCGTATG ATCGAGCAGG TCGACCGGGA GTTGACCGCG
CTTCCTGCCA TCCATGTCCT GATCGGCCAC AACCCTCTGT CGATGATGTA CGAGCATCAC
CGCAACCACG CGCGTCTCAT GCTGGGGGTT TTTGCCCTGA ACCGGTTTGA CCTGTTGGCC
GGAACCGTGC CGTGGTCATA CCGGGCCTGT CACGCCCATG GATTTTCATA CGAATATTTT
CGGGTCGAGC TGAAAGCCTG GAAACGAGCG GTGGCGCGGC ACATCGACGG GCTCTGCGCC
CGGGCGATAC TCGAGGTCTA TGACTGGATC CTGCGGAGGC ACGGTGAAAT GATCCAACTG
GCTGAACAAA GCTGCGGGCC GCCGATTGCA GCGGGATCTC CTCTGGATGA AACGGGGCAC
GCCTTCCTGT CGGCAGTGTT GGCAGGAGAC CGCCGGGAGT GCCTTCGCCT CGCCGGGAAC
TCGGCCGCGA CACCGCAAGG GCTGGAATCC TTCTACCTGG AGGTCGTTCA GCCCTGTATG
CACGAGCTGG GACGCCTCTG GGAGCAGGGA GAGATTTCGG TGGTGCAGGA AAACCTGGCC
ACAGCCATGA TGTCCGGTGT GATGGCGACG ATCCGCCCGC GCGTGAGGAT CGACGCCCCC
GAACGTGGAA AAGCCGTCGT CACGTCCGCT CCAAACGAAA CCCACACCTT GGGCGCATGG
CTCATCTCGG ATCTTCTCAG CCTGGACGGC TGGGAGGTGG ACTACCTCGG TGCCGCCTCC
TCCCGGCCGG ACATCATTGA CGTGCTTTTG AGCGTCAGGC CCGATCTTCT CGCCATTTCC
GTAGCCATGC CGTACAACCT GCACCCGGCG ATGAAGCTCA TGGCAGTCGT GCGAAAGCAG
CCCGCGCTGG CTGGAATCAA AATCATGATC GGCGGTTATT TCACCCGAAT CATCCCCGGT
CTCGATCGGC TGGCGGGTGC GGACGGAGTG GCGTCCGACG CGAAATCGGC CATTGCATTG
GCTGGAGAAT GGAGGCGATC ATGCACAGGA TGA
 
Protein sequence
MLNRIISEAK TLTHMPLEAA TVYDTFKGRM IEQVDRELTA LPAIHVLIGH NPLSMMYEHH 
RNHARLMLGV FALNRFDLLA GTVPWSYRAC HAHGFSYEYF RVELKAWKRA VARHIDGLCA
RAILEVYDWI LRRHGEMIQL AEQSCGPPIA AGSPLDETGH AFLSAVLAGD RRECLRLAGN
SAATPQGLES FYLEVVQPCM HELGRLWEQG EISVVQENLA TAMMSGVMAT IRPRVRIDAP
ERGKAVVTSA PNETHTLGAW LISDLLSLDG WEVDYLGAAS SRPDIIDVLL SVRPDLLAIS
VAMPYNLHPA MKLMAVVRKQ PALAGIKIMI GGYFTRIIPG LDRLAGADGV ASDAKSAIAL
AGEWRRSCTG