Gene Sfum_3240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3240 
Symbol 
ID4458443 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3969199 
End bp3969690 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content65% 
IMG OID639704012 
Producttransposase 
Protein accessionYP_847348 
Protein GI116750661 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0381334 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAAA TATCGTCTCG GCAACTGTCC GATGCCTTCT GGGAAAAGGT GGAGCCTTTG 
ATTCCGAGGC CCGAACGAGA CCCGGAAAGG AGCTACCGGC GAAAACCGGG AGGGGGCAGG
AAACCGCTGC CGCCGCGAAA AATCCTCGAA GCTGTTTTGT ACGTTCTCCG CACGGGTTGC
CGCTGGAAAT CGCTCCCCGG AGCACGCTTC GGCAGCCCCA GCGCCGTCCA CGCCCATTTC
ACCAGATGGA TGCGCGCGGG TTTCTTCACC CGGCTCTGGC GCGCGGGCCT GGCCGAATAT
GACGAGATGG AAGGCATCGC GTGGCGCTGG CAGGACAATG ACGCCGGAAC GCTCGAAGGG
GCGCCGGCCG ACCGGAAAGC CGGCGGCCGA AGGTCGAGGG GGAAGGGAGA AGACAAGATC
GAGGGAGCCG GCTACGGCGG CCGGTTCTGG GGTCCCGCGG TCAATCGTCG CCGTCGGGGC
GGATCGCATT GA
 
Protein sequence
MAEISSRQLS DAFWEKVEPL IPRPERDPER SYRRKPGGGR KPLPPRKILE AVLYVLRTGC 
RWKSLPGARF GSPSAVHAHF TRWMRAGFFT RLWRAGLAEY DEMEGIAWRW QDNDAGTLEG
APADRKAGGR RSRGKGEDKI EGAGYGGRFW GPAVNRRRRG GSH