Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_3236 |
Symbol | |
ID | 4458439 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 3958711 |
End bp | 3960621 |
Gene Length | 1911 bp |
Protein Length | 636 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639704008 |
Product | metal dependent phosphohydrolase |
Protein accession | YP_847344 |
Protein GI | 116750657 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2206] HD-GYP domain |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCGTC CCCTCTACAA CAGCAGAATC ATAAACACCT TTATCGCGCT GCTCAGGAAG CGTTATCCCT ACATCAACAT CTCGGATCTG CTCAATTATG CGGGAATGGA ACGCTACCAG GTCGAAGACG AAGGACACTG GTTCAGCCAG AGCCAGGTGG ACCGGTTTTA TGAACAGTTG GTGAACGTCA CCGGCAACAC GAACATCGCG CGGGAAGCCG GCAGGTTCGC GGCGTCGGCG GAATCGATCG GGGCCATGAA ACAGTACGTC CTCAGTCATG TGGCACCCGC CACCGCCTAC GAGATGCTCG GCAAAGCCAG CATCAACTTC ACGAGATCGT CGACCTGCAC GGCCAGGCGG CTTCGGTCGG AAACCGTCGA GCTCACCTTC ACTCCCGTCG AGGGTGTCCG GGAAAGACCC TACCAGTGCG AGAACAGGAT CGGACACATC GACGCGGTAT CCTTGGTGTT CAAGCATCGG CTGCCTAGAA TCGAACATCC GGAGTGCATG TTTCGCGACA ACGGCCAAGT TTGCCGTTAC ATCGTCTCGT GGCAGCGCTC GCCATCCGCA TTCTGGCACA AGGTGCGGAA TGCTTTCGCC GTCGGCATCG CGCTGGTGGG ACTCATCGCC TGCCAGGAGG TTTCCTCGTA CACCCTGGGT GTCTTTCTGG CGGCGGGCCT GCTCGGCGTG CTCCTCATCA GCCTCTACGC CTCGCATTTG CAGGTGCGCG AATTCAGCAG CGCCATTGTG AACCTCAGGG ACTCCAACGA CAAGCTGATC GAGCAGATCA ACACCAATTA TAACAATGCG TTGTTCATCA ACGAGATCGG TCAGGCGCTC AGCAAGCAGA TGGAAATCGA CGGCATCCTG AGCAATGTCA TACGCAAATT CGAGCAGCGG CTGGACTTCG ACCGCGGCAT GATCTGGCTG GTGAGCACGG ACAGAACAAG GCTGAATTTC TGCACGGGGT TCGGCTATTC GGAGGACTTG ATCGAGATTC TCAACAACTC CAGCTTCCGC GTGAGGTCGG ACTCGAGGGG CATCTTCATC ATCTCGTTGC GTGAACGCAA ACCTTTCCTC ATCAACAACA TCGATGAGAT CAAGGATGAA CTGTCGCCCC GGAGCCTTGA ATTCGCGCGG CAAATGAAAA CCAAGTCCTT CATCTGCTGC CCGATCATTT ACGAAGACGA CGCGTTGGGC ATCATCGCGG TGGACAACCT GCAGACCAAA AGGCTCCTGC TTCAGAGCGA CATCAGCCTC ATCATGGGAG TGGCCCAGGA AATCGCCATC AGCCTGCACA ATGCGGCCCT GATTCAGTCC AAACTGGAGC AGTTCCGGTC GATCCTGCAC ACCCTCGCCG CCAGTATTGA CGCCCGGGCC CCCCTCACTG CCGGTCATTC GGAACGGGTC ACCGAATACG CGGTCGGGAT CTCCGAGGAA ATGGGCATGC CGAAGGACTT TTGCGAAATG ATTCGGGTCG CGGCCTTGCT GCACGACTAC GGGAAGATCG GGGTTTGTGA CTCGATCCTG AAGAAAAACG GGAAGCTGGA GCCCGAGGAG CGGCAGGAAA TCGAGAAACA CGCTGAAAAA ACAAGAATCA TCTTGGAACA GATCCGTTTC GAGGGGTTGT ACCGGCAAGT CCCTGAGATC GCCGGCTGCC ACCACGAAAA ATATGACGGC AGCGGTTATC CGAAGGGGCT GCGGGGAATG GAAATCCCCC TCGGCGCAAG GATCCTCGCC GTGGCAGACG TGTTTGAGGC CATCACATCA AAGAGACACT ACCGGGACCC CATGCCATTG GGACAAGCCT TGGAGATTCT CAACCACGAA CGTGGAATTC ACTTCGACAG CGATGTCGTC GACGCTTTCC TCAGGTACCT TCAACGCAAG GAAATGGTGC CCCGGCCCTA G
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Protein sequence | MDRPLYNSRI INTFIALLRK RYPYINISDL LNYAGMERYQ VEDEGHWFSQ SQVDRFYEQL VNVTGNTNIA REAGRFAASA ESIGAMKQYV LSHVAPATAY EMLGKASINF TRSSTCTARR LRSETVELTF TPVEGVRERP YQCENRIGHI DAVSLVFKHR LPRIEHPECM FRDNGQVCRY IVSWQRSPSA FWHKVRNAFA VGIALVGLIA CQEVSSYTLG VFLAAGLLGV LLISLYASHL QVREFSSAIV NLRDSNDKLI EQINTNYNNA LFINEIGQAL SKQMEIDGIL SNVIRKFEQR LDFDRGMIWL VSTDRTRLNF CTGFGYSEDL IEILNNSSFR VRSDSRGIFI ISLRERKPFL INNIDEIKDE LSPRSLEFAR QMKTKSFICC PIIYEDDALG IIAVDNLQTK RLLLQSDISL IMGVAQEIAI SLHNAALIQS KLEQFRSILH TLAASIDARA PLTAGHSERV TEYAVGISEE MGMPKDFCEM IRVAALLHDY GKIGVCDSIL KKNGKLEPEE RQEIEKHAEK TRIILEQIRF EGLYRQVPEI AGCHHEKYDG SGYPKGLRGM EIPLGARILA VADVFEAITS KRHYRDPMPL GQALEILNHE RGIHFDSDVV DAFLRYLQRK EMVPRP
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