Gene Sfum_3236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3236 
Symbol 
ID4458439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3958711 
End bp3960621 
Gene Length1911 bp 
Protein Length636 aa 
Translation table11 
GC content57% 
IMG OID639704008 
Productmetal dependent phosphohydrolase 
Protein accessionYP_847344 
Protein GI116750657 
COG category[T] Signal transduction mechanisms 
COG ID[COG2206] HD-GYP domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCGTC CCCTCTACAA CAGCAGAATC ATAAACACCT TTATCGCGCT GCTCAGGAAG 
CGTTATCCCT ACATCAACAT CTCGGATCTG CTCAATTATG CGGGAATGGA ACGCTACCAG
GTCGAAGACG AAGGACACTG GTTCAGCCAG AGCCAGGTGG ACCGGTTTTA TGAACAGTTG
GTGAACGTCA CCGGCAACAC GAACATCGCG CGGGAAGCCG GCAGGTTCGC GGCGTCGGCG
GAATCGATCG GGGCCATGAA ACAGTACGTC CTCAGTCATG TGGCACCCGC CACCGCCTAC
GAGATGCTCG GCAAAGCCAG CATCAACTTC ACGAGATCGT CGACCTGCAC GGCCAGGCGG
CTTCGGTCGG AAACCGTCGA GCTCACCTTC ACTCCCGTCG AGGGTGTCCG GGAAAGACCC
TACCAGTGCG AGAACAGGAT CGGACACATC GACGCGGTAT CCTTGGTGTT CAAGCATCGG
CTGCCTAGAA TCGAACATCC GGAGTGCATG TTTCGCGACA ACGGCCAAGT TTGCCGTTAC
ATCGTCTCGT GGCAGCGCTC GCCATCCGCA TTCTGGCACA AGGTGCGGAA TGCTTTCGCC
GTCGGCATCG CGCTGGTGGG ACTCATCGCC TGCCAGGAGG TTTCCTCGTA CACCCTGGGT
GTCTTTCTGG CGGCGGGCCT GCTCGGCGTG CTCCTCATCA GCCTCTACGC CTCGCATTTG
CAGGTGCGCG AATTCAGCAG CGCCATTGTG AACCTCAGGG ACTCCAACGA CAAGCTGATC
GAGCAGATCA ACACCAATTA TAACAATGCG TTGTTCATCA ACGAGATCGG TCAGGCGCTC
AGCAAGCAGA TGGAAATCGA CGGCATCCTG AGCAATGTCA TACGCAAATT CGAGCAGCGG
CTGGACTTCG ACCGCGGCAT GATCTGGCTG GTGAGCACGG ACAGAACAAG GCTGAATTTC
TGCACGGGGT TCGGCTATTC GGAGGACTTG ATCGAGATTC TCAACAACTC CAGCTTCCGC
GTGAGGTCGG ACTCGAGGGG CATCTTCATC ATCTCGTTGC GTGAACGCAA ACCTTTCCTC
ATCAACAACA TCGATGAGAT CAAGGATGAA CTGTCGCCCC GGAGCCTTGA ATTCGCGCGG
CAAATGAAAA CCAAGTCCTT CATCTGCTGC CCGATCATTT ACGAAGACGA CGCGTTGGGC
ATCATCGCGG TGGACAACCT GCAGACCAAA AGGCTCCTGC TTCAGAGCGA CATCAGCCTC
ATCATGGGAG TGGCCCAGGA AATCGCCATC AGCCTGCACA ATGCGGCCCT GATTCAGTCC
AAACTGGAGC AGTTCCGGTC GATCCTGCAC ACCCTCGCCG CCAGTATTGA CGCCCGGGCC
CCCCTCACTG CCGGTCATTC GGAACGGGTC ACCGAATACG CGGTCGGGAT CTCCGAGGAA
ATGGGCATGC CGAAGGACTT TTGCGAAATG ATTCGGGTCG CGGCCTTGCT GCACGACTAC
GGGAAGATCG GGGTTTGTGA CTCGATCCTG AAGAAAAACG GGAAGCTGGA GCCCGAGGAG
CGGCAGGAAA TCGAGAAACA CGCTGAAAAA ACAAGAATCA TCTTGGAACA GATCCGTTTC
GAGGGGTTGT ACCGGCAAGT CCCTGAGATC GCCGGCTGCC ACCACGAAAA ATATGACGGC
AGCGGTTATC CGAAGGGGCT GCGGGGAATG GAAATCCCCC TCGGCGCAAG GATCCTCGCC
GTGGCAGACG TGTTTGAGGC CATCACATCA AAGAGACACT ACCGGGACCC CATGCCATTG
GGACAAGCCT TGGAGATTCT CAACCACGAA CGTGGAATTC ACTTCGACAG CGATGTCGTC
GACGCTTTCC TCAGGTACCT TCAACGCAAG GAAATGGTGC CCCGGCCCTA G
 
Protein sequence
MDRPLYNSRI INTFIALLRK RYPYINISDL LNYAGMERYQ VEDEGHWFSQ SQVDRFYEQL 
VNVTGNTNIA REAGRFAASA ESIGAMKQYV LSHVAPATAY EMLGKASINF TRSSTCTARR
LRSETVELTF TPVEGVRERP YQCENRIGHI DAVSLVFKHR LPRIEHPECM FRDNGQVCRY
IVSWQRSPSA FWHKVRNAFA VGIALVGLIA CQEVSSYTLG VFLAAGLLGV LLISLYASHL
QVREFSSAIV NLRDSNDKLI EQINTNYNNA LFINEIGQAL SKQMEIDGIL SNVIRKFEQR
LDFDRGMIWL VSTDRTRLNF CTGFGYSEDL IEILNNSSFR VRSDSRGIFI ISLRERKPFL
INNIDEIKDE LSPRSLEFAR QMKTKSFICC PIIYEDDALG IIAVDNLQTK RLLLQSDISL
IMGVAQEIAI SLHNAALIQS KLEQFRSILH TLAASIDARA PLTAGHSERV TEYAVGISEE
MGMPKDFCEM IRVAALLHDY GKIGVCDSIL KKNGKLEPEE RQEIEKHAEK TRIILEQIRF
EGLYRQVPEI AGCHHEKYDG SGYPKGLRGM EIPLGARILA VADVFEAITS KRHYRDPMPL
GQALEILNHE RGIHFDSDVV DAFLRYLQRK EMVPRP