Gene Sfum_3233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3233 
Symbol 
ID4458436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3954279 
End bp3955874 
Gene Length1596 bp 
Protein Length531 aa 
Translation table11 
GC content56% 
IMG OID639704005 
Productradical SAM domain-containing protein 
Protein accessionYP_847341 
Protein GI116750654 
COG category[C] Energy production and conversion 
COG ID[COG1032] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGATG CAATCGTAAT CTCCGATACC GGGAACGATA CCTACTCGGT TTCAAGCCTC 
CTCAGGCTGC AGGTGGAGGG GAGGCCCGCG ATCATCCAAA ACGTTCGCAA CATGCTCGAA
AATGATGGAA GGATCGTTGA CCCCGTCAAA GGCGAAAATG AAAACAATTG GCATTGTGCG
CCCAAGCTCA ACGGGATCGT GCTCCTGAGC CGCCTGCTCG GGGAGGGGGT CAACGCTGAA
TTGATCGATT CCTATTACAG TGAGCGCCAT CGTTTCCTGC AGTTGCTGCG CGACAACCCC
AAGATGGTGG TCATATCCAC AACCTTTATA CTCAATAAGA AAAGCCTCTA CGATCTTGTT
CGCGACATAC GTTCGGTGGC GCCCGATATA TATATTGTTG CCGGAGGCCC GTTTGTCTAT
TCGTCCTATC TTATCATGCA GCGTCGGGGA AGCTCCGGCT ATGATGTGAC GAGCCCGTCC
GACGACTACT TGTTTCTGAA CGACGACAAC CGGCCCGATG TCGATCTGTA TATCGTCTCC
ATGAAAGGCG AATGGGTGCT TTCGAAGGCG CTCGGCCTGA TCAAGAGCGG GAAAGCCGTG
TCCGGGCTGC CCGATGTCGC GCACTGGGAC GGCCGGCGGT ACGTATTCTC GCCCAGGAGC
GTGAGCGAGG TCGACCCGGA CGATCCGAGC ATCGACTGGG ACGGCATGCC GGATGACCTG
TTCAAATCCG GCGCCGTCAA TGTTCAGGCC AGCTACGGTT GCCCCTGCAA GTGCGAATTC
TGCAATTTCG TAAGGGGGGA CCGGCCCGCG CACGTGAAAC CCCTCGGCGT CCTGGTGTCC
GAGTTGACTC GAATTGCGGC CAGGGGAATC AAGTACGTGA GATTTGTGGA CGACAATTTC
AGGCTTGGCA GGAACGACCT GAACCGGGTG TGCGAAGCGT TTCTGGAGGC GGGACTGAAC
CTGAAATGGA TGAGTTTTTT CAGGGCAAGC TCCCTCGAAG GCGCGGATTT GGAGCTCCTC
AAGCGTGCCG GCTGCATCGA GGTGCAGATG GGAGTGGAAT CGGCGGACAG AGAAGTCCTG
AGAAGGATGA ACAAGAAGTC CGACCCCGAC ATGTACGCCC GCGTGATCGG GCGACTGCTG
GACGCCGGGA TCGACTGTTC CTGCTGCTTT ATCGTGGGTT TTCCCGGAGA AACCAGGGAA
AGCTTCGAAA GAACGGTGGA TTTCATCGAA AGCATGCCGA ACCCGTCTCA ACCCGGGTTA
TTTTCGTGGT CCATCTATCC GTTCCTTCTG GTGCCGCTCA GCCCCATCTA CGAACCGGCG
AAGCGGGCCG AATACGGTCT GTCGGGTTAC ATGAAGGAAT GGAAGCATTC CACCATGGAT
TCCGCCACCG CTCACCGGTG CATCCGCAGT GCGTTCCGCC GGATCGAGAA CACAAGCCCC
ATCTACAGTG GTGACAATCT GGAGATGATG GCCGGGCTGT CATTGGAGAA GAAAAAGAAT
TTCATCAAAT TGCGGCACAG TCTGTCGAAA CGATTCCTGG ATGCACCTTA CGACAAATCG
TTGGTCGTGC GCTCGTTTGC CGAAATCCTG AAGTAA
 
Protein sequence
MLDAIVISDT GNDTYSVSSL LRLQVEGRPA IIQNVRNMLE NDGRIVDPVK GENENNWHCA 
PKLNGIVLLS RLLGEGVNAE LIDSYYSERH RFLQLLRDNP KMVVISTTFI LNKKSLYDLV
RDIRSVAPDI YIVAGGPFVY SSYLIMQRRG SSGYDVTSPS DDYLFLNDDN RPDVDLYIVS
MKGEWVLSKA LGLIKSGKAV SGLPDVAHWD GRRYVFSPRS VSEVDPDDPS IDWDGMPDDL
FKSGAVNVQA SYGCPCKCEF CNFVRGDRPA HVKPLGVLVS ELTRIAARGI KYVRFVDDNF
RLGRNDLNRV CEAFLEAGLN LKWMSFFRAS SLEGADLELL KRAGCIEVQM GVESADREVL
RRMNKKSDPD MYARVIGRLL DAGIDCSCCF IVGFPGETRE SFERTVDFIE SMPNPSQPGL
FSWSIYPFLL VPLSPIYEPA KRAEYGLSGY MKEWKHSTMD SATAHRCIRS AFRRIENTSP
IYSGDNLEMM AGLSLEKKKN FIKLRHSLSK RFLDAPYDKS LVVRSFAEIL K