| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3231 |
|---|
| Symbol | |
|---|
| ID | 4458434 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | + |
|---|
| Start bp | 3952383 |
|---|
| End bp | 3952898 |
|---|
| Gene Length | 516 bp |
|---|
| Protein Length | 171 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 639704003 |
|---|
| Product | peptidyl-prolyl cis-trans isomerase, cyclophilin type |
|---|
| Protein accession | YP_847339 |
|---|
| Protein GI | 116750652 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGAGC AGCAAAATCC GGTGGCAGTG ATTCAAACGT CTGAGGGCGA CATCCGCGTC
GAGCTCTGGG CGGACAAGGC CCCGATCACG GTGAAAAATT TCCTTCGCTA CGTGGACGAC
GGGTTTTACG ATAAGACCGT CTTTCACCGG GTCATCGATG ATTTCATGAT CCAGGGAGGC
GGCATGACCG CCGACATGCG CAGCAAGACA CCCCGCGATC CCATTAAGAA CGAGGCGCGC
GCGGAGCTGA AGAATACCAG GGGAACGATC GCGATGGCGC GCACCGGCGT TGTGGACAGC
GCCACATGTC AGTTCTTCAT CAATGTGAAG GACAACGACT TTCTCAATCA TCGTGACGAT
AGCCCCGCGG GATTCGGTTA TGCGGTCTTC GGCCATGTCA TCGACGGCAT GGACGTTGTG
GACCGGATCA AAAAAGTCCC TACGGCCGGT GCAGGCATGC ACCAGAATGT GCCGGTCAAA
CCGGTGGTCA TCGAGAGTGT CAAGAGAGCC CAATGA
|
|---|
| Protein sequence | MTEQQNPVAV IQTSEGDIRV ELWADKAPIT VKNFLRYVDD GFYDKTVFHR VIDDFMIQGG
GMTADMRSKT PRDPIKNEAR AELKNTRGTI AMARTGVVDS ATCQFFINVK DNDFLNHRDD
SPAGFGYAVF GHVIDGMDVV DRIKKVPTAG AGMHQNVPVK PVVIESVKRA Q
|
|---|
| |