Gene Sfum_3227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3227 
Symbol 
ID4458430 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3947586 
End bp3948296 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content62% 
IMG OID639703999 
Productcytochrome b5 
Protein accessionYP_847335 
Protein GI116750648 
COG category[R] General function prediction only 
COG ID[COG4892] Predicted heme/steroid binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.852192 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAAT ACGACCCGGA AACCCTGGCC CGCTTTGACG GCAAGGACGG AAAGCCGGTG 
TACATCGCTC ACCAGGGCAA AGTTTACGAC GTTTCGAACA GCAAGCTCTG GAAAACAGGA
ATCCACATGC GGCGACATCC CGCCGGCAGG GATCTGACCA CGGACATCCA GGCCGCGCCT
CACGGCCCGG AGGTGCTCGA ACGAGTCCCC CAGGTCGGGG TGCTCAAGGA AGCCGTCCCG
GAGCGGGGTG CCTTGCCAAT CATCGAAGGA CTGCTGCACA GGTATCCCAT GCTCAGGCGC
CATCCGCACC CCATGACCGT GCACTTCCCC ATCGTTTTCA TGATGGCCGC GCCGTCTTTC
AACATTCTTT ACCTGCTCAC CGGGGTCAAA TCTTTCGAAG TCACCGCACT CCACTGCCTC
GGTGCAGGAC TCCTTTTCAC CCCCCTGGTG ATGCTCACCG GGCTCTTGAC CTGGCGGCTG
AACTACCTGG CCCGGCCGCT CAAGCCGATC AACATCAAGA TCGCGGTTTC GGCCGTCATG
CTCCTGGTGG GGCTCGCCGC ATTCTTCTGG CGGGTCGCCG TTCCGGGCTT GATGGACCTC
CCGGGGGCGG CGGGCACCCT CTACTTTCTG CTCACCCTCT CGCTCATTCC CATGGTGGGC
GTGATCGGAT GGCATGGGGC GATGTTGACG TTTCCCTTCG AGCGGGAGTA G
 
Protein sequence
MIEYDPETLA RFDGKDGKPV YIAHQGKVYD VSNSKLWKTG IHMRRHPAGR DLTTDIQAAP 
HGPEVLERVP QVGVLKEAVP ERGALPIIEG LLHRYPMLRR HPHPMTVHFP IVFMMAAPSF
NILYLLTGVK SFEVTALHCL GAGLLFTPLV MLTGLLTWRL NYLARPLKPI NIKIAVSAVM
LLVGLAAFFW RVAVPGLMDL PGAAGTLYFL LTLSLIPMVG VIGWHGAMLT FPFERE