Gene Sfum_3226 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3226 
Symbol 
ID4458429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3946091 
End bp3947032 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content60% 
IMG OID639703998 
ProductUspA domain-containing protein 
Protein accessionYP_847334 
Protein GI116750647 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCAGG ACAGGAGAAG AATTCTCGTC GCGGTGGATG GCTCCGAACA GACTCAGGAG 
GCCGTAAGCT ACTTGAGCGG TATCGTGCCG TCTTTTGAGA CGAGCGTGGT CCTGTTCCAC
GTCATGAACA GGGTGCCGGA TGCCTTCTGG GACTGGGAGA AGGACCCTCT GACTCCAACG
CATCTCGATT ACCTCAAAGA TTGGGAAATG CAGAAAGAGA ACCGCATACG CCAGTTCATG
CGCCAGGCGC GGCGCGTGCT GGTGGACGTC GGAATACCCG AATATTCCGT GATGATCAGC
ATCCAGAAAA TCAGGGAAGG AATTGCCCGG GACATTCTGA CGGAAGCCCA GAGGGGTTAT
GACGCGGTTG TCGTCGGGCG CACGGGACTC GGAGGCATCG ACGAACGGAT GCTCGGCAGC
GTCGCCGGCA AGACCACCGC AAAGCTGAAT ACGAGCGCGG TCTGGCTGGT GGGAGGCAAA
CCCCGGAAGG GCAAGATCCT CATCGCCATG GATTCTTCCG CGGGAGCGAT GCGGGCGGTC
GACCACGTCT GCCGGATGGC CGCCGTCAAG ACCCACTCGA TAAGCCTCCT TCACGTGGTC
AGAGGAATAT CGGTCACTGC CGCCGGCCAG GAGCAGATCT TTCCGGAAGG CTACCGGCAA
CGGCTCCTCG AAGAGGCGGA AAACGAGATA CGACCGGCAT TCGAAGAGGC GACCGAACGA
CTGAAAGCGG CGGGAGTCAA GGCGGACAGG ATCTCCATCA AGGTGATCTC AGGGGTCGCA
AGCCGGGCCG GGGCGATTAT CGAAGAAGCA CGCCAGGGAG GTTTCGGCAC TATCGTGGTG
GGCAGAAAAG GGCTGTCCGG AATCGAAGAA TTCGACATGG GGCGTGTCAC CTTCAAGCTT
ACGCAAATCG CCGGAAACAT GGCCCTGTGG GTCGTGGCCT GA
 
Protein sequence
MSQDRRRILV AVDGSEQTQE AVSYLSGIVP SFETSVVLFH VMNRVPDAFW DWEKDPLTPT 
HLDYLKDWEM QKENRIRQFM RQARRVLVDV GIPEYSVMIS IQKIREGIAR DILTEAQRGY
DAVVVGRTGL GGIDERMLGS VAGKTTAKLN TSAVWLVGGK PRKGKILIAM DSSAGAMRAV
DHVCRMAAVK THSISLLHVV RGISVTAAGQ EQIFPEGYRQ RLLEEAENEI RPAFEEATER
LKAAGVKADR ISIKVISGVA SRAGAIIEEA RQGGFGTIVV GRKGLSGIEE FDMGRVTFKL
TQIAGNMALW VVA