Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_3226 |
Symbol | |
ID | 4458429 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 3946091 |
End bp | 3947032 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639703998 |
Product | UspA domain-containing protein |
Protein accession | YP_847334 |
Protein GI | 116750647 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCAGG ACAGGAGAAG AATTCTCGTC GCGGTGGATG GCTCCGAACA GACTCAGGAG GCCGTAAGCT ACTTGAGCGG TATCGTGCCG TCTTTTGAGA CGAGCGTGGT CCTGTTCCAC GTCATGAACA GGGTGCCGGA TGCCTTCTGG GACTGGGAGA AGGACCCTCT GACTCCAACG CATCTCGATT ACCTCAAAGA TTGGGAAATG CAGAAAGAGA ACCGCATACG CCAGTTCATG CGCCAGGCGC GGCGCGTGCT GGTGGACGTC GGAATACCCG AATATTCCGT GATGATCAGC ATCCAGAAAA TCAGGGAAGG AATTGCCCGG GACATTCTGA CGGAAGCCCA GAGGGGTTAT GACGCGGTTG TCGTCGGGCG CACGGGACTC GGAGGCATCG ACGAACGGAT GCTCGGCAGC GTCGCCGGCA AGACCACCGC AAAGCTGAAT ACGAGCGCGG TCTGGCTGGT GGGAGGCAAA CCCCGGAAGG GCAAGATCCT CATCGCCATG GATTCTTCCG CGGGAGCGAT GCGGGCGGTC GACCACGTCT GCCGGATGGC CGCCGTCAAG ACCCACTCGA TAAGCCTCCT TCACGTGGTC AGAGGAATAT CGGTCACTGC CGCCGGCCAG GAGCAGATCT TTCCGGAAGG CTACCGGCAA CGGCTCCTCG AAGAGGCGGA AAACGAGATA CGACCGGCAT TCGAAGAGGC GACCGAACGA CTGAAAGCGG CGGGAGTCAA GGCGGACAGG ATCTCCATCA AGGTGATCTC AGGGGTCGCA AGCCGGGCCG GGGCGATTAT CGAAGAAGCA CGCCAGGGAG GTTTCGGCAC TATCGTGGTG GGCAGAAAAG GGCTGTCCGG AATCGAAGAA TTCGACATGG GGCGTGTCAC CTTCAAGCTT ACGCAAATCG CCGGAAACAT GGCCCTGTGG GTCGTGGCCT GA
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Protein sequence | MSQDRRRILV AVDGSEQTQE AVSYLSGIVP SFETSVVLFH VMNRVPDAFW DWEKDPLTPT HLDYLKDWEM QKENRIRQFM RQARRVLVDV GIPEYSVMIS IQKIREGIAR DILTEAQRGY DAVVVGRTGL GGIDERMLGS VAGKTTAKLN TSAVWLVGGK PRKGKILIAM DSSAGAMRAV DHVCRMAAVK THSISLLHVV RGISVTAAGQ EQIFPEGYRQ RLLEEAENEI RPAFEEATER LKAAGVKADR ISIKVISGVA SRAGAIIEEA RQGGFGTIVV GRKGLSGIEE FDMGRVTFKL TQIAGNMALW VVA
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