Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_3214 |
Symbol | |
ID | 4458452 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 3936995 |
End bp | 3937198 |
Gene Length | 204 bp |
Protein Length | 67 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 639703986 |
Product | cold-shock DNA-binding domain-containing protein |
Protein accession | YP_847322 |
Protein GI | 116750635 |
COG category | [K] Transcription |
COG ID | [COG1278] Cold shock proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0979697 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGGAAG GCCGGGTAAA GTGGTTCAAC GACAAAAAGG GCTACGGTTT CATCGAAACC ACGGATCAGG GTGACGTATT CGTACACTAC AGCGCCATTG CTGCGGAAGG CTTCCGCAGC CTCAGTGAGG GCGAACGGGT GACATTCGAT GTGGAACGCG GGCCGAAGGG ACCCCAGGCT GTGAATGTGA AGAAAGTCGA GTAG
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Protein sequence | MSEGRVKWFN DKKGYGFIET TDQGDVFVHY SAIAAEGFRS LSEGERVTFD VERGPKGPQA VNVKKVE
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