Gene Sfum_3185 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3185 
Symbol 
ID4458492 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3908487 
End bp3908933 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content59% 
IMG OID639703957 
Productribosomal protein L9 
Protein accessionYP_847293 
Protein GI116750606 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0359] Ribosomal protein L9 
TIGRFAM ID[TIGR00158] ribosomal protein L9 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.564436 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTGA TTTTGACTGA GAACCTCTCT TCTCTGGGCC AGATCGGGCA GGTGGTCAAC 
GTGGCCCCGG GGTATGCCCG CAACTATCTG TTCCCTCAGG GACTGGCTCT GGAAGCCACC
GGAAAGAACG TGAAGGAGCT GGACCATCGT AAGCGGGTGC TGGCGGCCAA GCGCGAAAAG
ATTCGCCAGG AAATGCTTTC GGTGGCCGAG AAGATCAACC AGGTCAAGCT CGTGCTGCGC
CGGAAAGTGG CCGACGAGGA CAAGCTGTAC GGCTCGGTGA GTGCCGCCGA CATCCAGAGC
GCGCTCGAGG AACGGGGCTT CATCGTGGCC CGCAAGGACA TTCAGCTCGA TCAGCCCATC
AAGCAACTCG GGGAATTCAC GGTTTCCGTC CGCGTGGACG CTCAGATTGC GGCCACCGTC
GGTGTCGTGG TTGAAAAAGA AGAGTAG
 
Protein sequence
MKVILTENLS SLGQIGQVVN VAPGYARNYL FPQGLALEAT GKNVKELDHR KRVLAAKREK 
IRQEMLSVAE KINQVKLVLR RKVADEDKLY GSVSAADIQS ALEERGFIVA RKDIQLDQPI
KQLGEFTVSV RVDAQIAATV GVVVEKEE