| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3183 |
|---|
| Symbol | |
|---|
| ID | 4458490 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | - |
|---|
| Start bp | 3904795 |
|---|
| End bp | 3906393 |
|---|
| Gene Length | 1599 bp |
|---|
| Protein Length | 532 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639703955 |
|---|
| Product | small GTP-binding protein |
|---|
| Protein accession | YP_847291 |
|---|
| Protein GI | 116750604 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2262] GTPases |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR03156] GTP-binding protein HflX |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGCCCGCG ATCTTGCCCG CCTCTCCTTT GAATGCGGGC GCCGGCTCGG GCTTCTCATC
GGCCGCGACG GCACGGTGGA AATGGTGCTG GTGGGGGGCC CCCGCTCGCT CTTTATCCCC
GATCTGCCGA AGAGCCGCGG CGGGCGGTGG CGTTTGCGCG GGCTGCGGCT GGTCCATACG
CATCTGCAGG CCGAAGGCCT CTCGCAAGAC GATCTCATGG ACCTGGTGTT CCTGCGCCTC
GACTGTGTGG CGGGAATCCG GGTCGATCCC AACGGCGGCG CCACGCTGCT CGACGTGGCC
CATATCCTTC CTGGGGCCGG CCACGATCGC GGATGGGAAG TGCTTCCGCC CCTGTGGTGC
TACGATCCCG ACCTGGACTT TCAGGAGCTG GTGAAGTCCC TGGAAGATGA GCTCGACCGG
AATCGGCTCG CCATTCCGGC CACCACCCGG CAGGACCGGG CGATCCTGGT GAGCGTCACG
GAAAAGGACC GGGAGACCGC CCGCCGGTCC ATGGAAGAGC TGGTCGAGCT GGCCCGCACC
AGCGGGATCG TGGTCGCGGA CACCATCGTG CAGCGCCTGC GCTCCGTCAA TCCGAAGTAT
CTCATCGGGA AAGGCAAGCT CAGCGAAATC GTGCTCCGGG CGTTGCAGTG CGGAGTGGAT
CTCCTCATTT TCGACCGGGA GCTGAACCCG TCCCAGGTGA GATCCCTCAC AGACACCACC
GAGCTGCGGG TGATCGACCG CACCCAGCTC ATCCTGGACA TTTTCGCCCA GCGCGCCCAG
AGCCGCGAAG GGAAGATTCA GGTCGAGACG GCGCAGCTCA AGTATCTGCT GCCCCGCCTG
GGGGTCAAGG ACGACGCGCT TTCCAGGCTG ACCGGGGGAA TCGGGGCCAG AGGCCCCGGG
GAAACGACGC TCGAAATCAA CCGGCGGCGC ATCAAGGACC GGATCGCCCA CCTCGACGAC
CAGCTCCGGG GGGTGAGGCG CAACCGCGAT CAGCGCAGGG CCAGGCGGCT GCGCAAGGAC
ATCCCCACCG TTTCCATCGT GGGCTACACC AACGCCGGCA AGTCCACCCT GCTCAACACC
CTGACGCACA GCGGCGTGTT CGTGGAAGAC AAGCTCTTCG CCACCCTCGA CCCCACCAGC
AGGAGGCTGC GGTTTCCGCG GGATTTCGAA GTGATCGTGA CCGACACCGT CGGGTTCATC
CGCGACCTTC CCCAGGACCT CCTCGACGCC TTCGCGGCGA CTCTAGAGGA ACTGGACGAC
GCTGATCTGC TGTTGCACGT GGTGGACATC AGCAATCCGC ACTTCGAGGA ACAGATGGAA
GCGGTGGACC GCATCCTCGG GAAGCTCGAG CTGCAGGCCA AGCCCACCGT CCTGGTCTTC
AACAAGATTG ACCGGGTGGA CCCGGAATGG GCGCGCCGGA AGGTCCGGCG TCACGGCGGC
GTGGCCATAT CCGCCCTGTC GACGGGCACC GTCGATCCGC TCATCGCGGC CATGCAGGAC
CAGGTGGAGG CACTGATGGA GGAGGGTTTC TATGCGGCGG CGCGCCAGCC GGAGCCCGAA
ATTGCCGAAG AGCCCGACGA GAGCGCCTGG GAACTCTAG
|
|---|
| Protein sequence | MARDLARLSF ECGRRLGLLI GRDGTVEMVL VGGPRSLFIP DLPKSRGGRW RLRGLRLVHT
HLQAEGLSQD DLMDLVFLRL DCVAGIRVDP NGGATLLDVA HILPGAGHDR GWEVLPPLWC
YDPDLDFQEL VKSLEDELDR NRLAIPATTR QDRAILVSVT EKDRETARRS MEELVELART
SGIVVADTIV QRLRSVNPKY LIGKGKLSEI VLRALQCGVD LLIFDRELNP SQVRSLTDTT
ELRVIDRTQL ILDIFAQRAQ SREGKIQVET AQLKYLLPRL GVKDDALSRL TGGIGARGPG
ETTLEINRRR IKDRIAHLDD QLRGVRRNRD QRRARRLRKD IPTVSIVGYT NAGKSTLLNT
LTHSGVFVED KLFATLDPTS RRLRFPRDFE VIVTDTVGFI RDLPQDLLDA FAATLEELDD
ADLLLHVVDI SNPHFEEQME AVDRILGKLE LQAKPTVLVF NKIDRVDPEW ARRKVRRHGG
VAISALSTGT VDPLIAAMQD QVEALMEEGF YAAARQPEPE IAEEPDESAW EL
|
|---|
| |