Gene Sfum_3181 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3181 
Symbol 
ID4458487 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3902437 
End bp3903261 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content57% 
IMG OID639703952 
Producthypothetical protein 
Protein accessionYP_847289 
Protein GI116750602 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.14574 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAACGA AGAGAGACTA CACTGCCGAT GGTGTCGAAG CCGCCCGCAA AGTGGTGATC 
GAGCTTGCCC GCCTGCTGGG GGAATACCGG CATCACATCG TGATCGTCGG CGGATGGGTG
CCGGACCTCC TCTTTCCGGG GAAGCAACCG CCCCATGCGG GCAGCCTCGA CGTGGACCTT
GCCCTCGACC ATACGCATCT GACGGAGGAG GGCTACAGAT CCATCCAGGA ACTTTTTACC
GGTCGAGGAT ACAGACAGGG GAATCAGCCC TTCATTTACC TGCGCGATGT CAGTGTGGGC
GGCAGGCCAA TCACCGTAGA GGTGGATCTA CTCGCCGGGG AGTATGAGGG AACGGGGAAG
GGCCACAGGC ACCAGAAACT GCAGGGAGTT CAGGCAAGAA AGGCGCGAGG GTGTGACATC
GCCTTCAACA ACCCGATGGA GGTAACGATT GATGGGGAGC TCCCTGATGG TGGTGTCGAT
TCGGTTCGGA TCCAGGTGGC CTCGATCGTC TCTTTTCTGG TCATGAAGGG TATGGCCCTC
GATGACCGTC TAAAAGAAAA AGACGCTTAC GATATATATT ATTGCATCCT GCACTATCCT
GGAGGTCTGG ATGCCCTGGC GGAGGAACTC ATATCTCATG TTGATCACAG GCTGGTGATG
GAAGGATTCG GGAAGATCGC CAGGCACTTC GCTTCCGAAG CGCACCTTGG TCCCACACAC
GTGGCCGCCT TCATGGACGT TACCGATCCG GAAGATCGTG CATTGCTGTG CCGGGATGCG
TATGAACGCG TCAACTATGT CCTGGAAAAG CTGGGGATTG GATGA
 
Protein sequence
MVTKRDYTAD GVEAARKVVI ELARLLGEYR HHIVIVGGWV PDLLFPGKQP PHAGSLDVDL 
ALDHTHLTEE GYRSIQELFT GRGYRQGNQP FIYLRDVSVG GRPITVEVDL LAGEYEGTGK
GHRHQKLQGV QARKARGCDI AFNNPMEVTI DGELPDGGVD SVRIQVASIV SFLVMKGMAL
DDRLKEKDAY DIYYCILHYP GGLDALAEEL ISHVDHRLVM EGFGKIARHF ASEAHLGPTH
VAAFMDVTDP EDRALLCRDA YERVNYVLEK LGIG