Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_3180 |
Symbol | |
ID | 4458486 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 3901382 |
End bp | 3902443 |
Gene Length | 1062 bp |
Protein Length | 353 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 639703951 |
Product | hypothetical protein |
Protein accession | YP_847288 |
Protein GI | 116750601 |
COG category | [S] Function unknown |
COG ID | [COG4861] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATCT CCCCCGAAGA ATTCGCCGAA AAGGCAGTGA ACGCAATCCA CTCCTGTTTG GAGGGTATTC CTTTCGTCGA GATAAAGGCC ATAATCAAAG AGGTCAGATC GAGTTACCGG CGGCCCGATC TCCTGATCAC CGTTGGACTC CCTTACGGAG AACAAAGCCT GATAGCTGAA ATGAAAAGCA GCGGGGAGCC GCGGTATGTG CGGGAAGCCG CGAGCCAGTT GGTGAAGTAC CGCTATTCAG CCCCACCTGG AACCTATGGT CTGGTGATTG CCCCGTTCAT CTCTCCCAAA GCCGCGGAGA TTTGCGCCGA GGAAAAAATC GGGTATGTGG ACTTCAGCGG CAACTGCCTT CTGTCCTTTG GGTATGTCTA CCTCGAGAGA CAGGGCAGGC CAAATCTCTT TGCCGAGAGG CGCGATTTGC GCTCGCTCTA CTCGCCAAAG GCCGAGCGAA TTCTCCGCGT GCTTCTTACC TCCCCACACG GACGGTGGAA GTTGCAGGAC TTGGCCAAGG AAGCACAAGT CAGTCTGGGG CAGGTTTCGA AAGTAAAAGC TCTCCTGGGC GCTCGCGAGT GGTCGTCGCC TGAGCATGGG CAGTTCCAAT TGACAAAGCC CTTCGAACTC CTGTCGGAAT GGGCCGCAAA TTATGATGCG AAAAGGAATG AGGGACGCAA CTTCTACACC TTTAAGAAAG TGTGGGAATT TGAAGCCGAC CTGGCCGAGG CCTGTGCCGA GAGCGGAACG GAGTATGCGC TGACCGGATT TTCCGGGGCT GCGAGGCTGG CCCCGGCAGT GCGGTATCAG CGTGCCGCGG CATATGTCAA CGTTCCACAA GAGGAACTGG CCTTCCGGCT TGGCTTGAAG GAAGTCTCCA GCGGGGCGAA TGTCCTTCTG ATGCGGCCAT ACGACGCCGG AGTCTTTTAT GGCATAAGAT CTGTGGGCGA CATTCGGATC GCCTCGCCGG TTCAACTTTA CCTGGACCTC ATGGCCATCA AGGGGCGAGG CGAGGAAGCC GCTCAGGCTG TCCTCGAGCA GGCCATCATG CCATTATGGT AA
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Protein sequence | MKISPEEFAE KAVNAIHSCL EGIPFVEIKA IIKEVRSSYR RPDLLITVGL PYGEQSLIAE MKSSGEPRYV REAASQLVKY RYSAPPGTYG LVIAPFISPK AAEICAEEKI GYVDFSGNCL LSFGYVYLER QGRPNLFAER RDLRSLYSPK AERILRVLLT SPHGRWKLQD LAKEAQVSLG QVSKVKALLG AREWSSPEHG QFQLTKPFEL LSEWAANYDA KRNEGRNFYT FKKVWEFEAD LAEACAESGT EYALTGFSGA ARLAPAVRYQ RAAAYVNVPQ EELAFRLGLK EVSSGANVLL MRPYDAGVFY GIRSVGDIRI ASPVQLYLDL MAIKGRGEEA AQAVLEQAIM PLW
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