Gene Sfum_3180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3180 
Symbol 
ID4458486 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3901382 
End bp3902443 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content56% 
IMG OID639703951 
Producthypothetical protein 
Protein accessionYP_847288 
Protein GI116750601 
COG category[S] Function unknown 
COG ID[COG4861] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATCT CCCCCGAAGA ATTCGCCGAA AAGGCAGTGA ACGCAATCCA CTCCTGTTTG 
GAGGGTATTC CTTTCGTCGA GATAAAGGCC ATAATCAAAG AGGTCAGATC GAGTTACCGG
CGGCCCGATC TCCTGATCAC CGTTGGACTC CCTTACGGAG AACAAAGCCT GATAGCTGAA
ATGAAAAGCA GCGGGGAGCC GCGGTATGTG CGGGAAGCCG CGAGCCAGTT GGTGAAGTAC
CGCTATTCAG CCCCACCTGG AACCTATGGT CTGGTGATTG CCCCGTTCAT CTCTCCCAAA
GCCGCGGAGA TTTGCGCCGA GGAAAAAATC GGGTATGTGG ACTTCAGCGG CAACTGCCTT
CTGTCCTTTG GGTATGTCTA CCTCGAGAGA CAGGGCAGGC CAAATCTCTT TGCCGAGAGG
CGCGATTTGC GCTCGCTCTA CTCGCCAAAG GCCGAGCGAA TTCTCCGCGT GCTTCTTACC
TCCCCACACG GACGGTGGAA GTTGCAGGAC TTGGCCAAGG AAGCACAAGT CAGTCTGGGG
CAGGTTTCGA AAGTAAAAGC TCTCCTGGGC GCTCGCGAGT GGTCGTCGCC TGAGCATGGG
CAGTTCCAAT TGACAAAGCC CTTCGAACTC CTGTCGGAAT GGGCCGCAAA TTATGATGCG
AAAAGGAATG AGGGACGCAA CTTCTACACC TTTAAGAAAG TGTGGGAATT TGAAGCCGAC
CTGGCCGAGG CCTGTGCCGA GAGCGGAACG GAGTATGCGC TGACCGGATT TTCCGGGGCT
GCGAGGCTGG CCCCGGCAGT GCGGTATCAG CGTGCCGCGG CATATGTCAA CGTTCCACAA
GAGGAACTGG CCTTCCGGCT TGGCTTGAAG GAAGTCTCCA GCGGGGCGAA TGTCCTTCTG
ATGCGGCCAT ACGACGCCGG AGTCTTTTAT GGCATAAGAT CTGTGGGCGA CATTCGGATC
GCCTCGCCGG TTCAACTTTA CCTGGACCTC ATGGCCATCA AGGGGCGAGG CGAGGAAGCC
GCTCAGGCTG TCCTCGAGCA GGCCATCATG CCATTATGGT AA
 
Protein sequence
MKISPEEFAE KAVNAIHSCL EGIPFVEIKA IIKEVRSSYR RPDLLITVGL PYGEQSLIAE 
MKSSGEPRYV REAASQLVKY RYSAPPGTYG LVIAPFISPK AAEICAEEKI GYVDFSGNCL
LSFGYVYLER QGRPNLFAER RDLRSLYSPK AERILRVLLT SPHGRWKLQD LAKEAQVSLG
QVSKVKALLG AREWSSPEHG QFQLTKPFEL LSEWAANYDA KRNEGRNFYT FKKVWEFEAD
LAEACAESGT EYALTGFSGA ARLAPAVRYQ RAAAYVNVPQ EELAFRLGLK EVSSGANVLL
MRPYDAGVFY GIRSVGDIRI ASPVQLYLDL MAIKGRGEEA AQAVLEQAIM PLW