Gene Sfum_3179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3179 
Symbol 
ID4458485 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3899759 
End bp3900571 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content46% 
IMG OID639703950 
Producthypothetical protein 
Protein accessionYP_847287 
Protein GI116750600 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.212928 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGATGCA TGCGCGTTGC TTTGCTGTTT GTTTTCTTGC TGGCCGGCTC GGTTGCCGCT 
GGAGCGGGCG AGGTGGTTGT GGAGTTCACA AGCGATGGAC CCGGTGGACA AAGTCCCTAC
ACAATCATCA AGAATGCTCT TGGTACCGAT TCTCTCGAGG TGCCTGACAA TTTTCATTCC
CCACCCGTTG CCCACATTCA GGACCAGACG CTGGTCGCAG TCGGCAACTG TTTTCTTTTC
ATCCTTCACC GGGATAAAGA CGGCGACCCG ACCGGCACAA CCAAGAATCA AAGAAACGAA
ATAAAGGTTG GCAAGTACGC CATCGACGAA GCGAAGGGAA CGCCGGACAA TCCGCTAACG
TATGAGTGGC TTTTCAAGGT AGGGAAGGAT ATGAAAGTCT CCAGGGAATT CACTCATATC
TTCCAACTGA AAAGCGTTGG CGGAGATGAT TCGCAACCGA TTATTACCCT GACTGGAGCA
AAGGTATCAG GAAATGACAG ATTGCAGCTT AGATATAATC AAAGCTCTGC TTCCAAGCTT
CAAATACTGC GTAGCATCCC ATGGTCATCA GCTAGAAACA GGTGGATAAA AGCAACGATA
TCGACTACGT TCAAGGATGA TGGATATCTT AAAGTCAGAC TTTCAAGACT CAGCGATAAC
TATACTATAC TATCTTATAG TAATCAAAAT ATTGACATGT GGCGCGGTGG AACATTCGTC
CGATCCAAAT ATGGCATATA TCGCAGTCTC AATTACAAAA CGGAGTTAAA TGATGGGAGA
GTGTTCTTTG CTAACTTTCG TATCATAAAA TAA
 
Protein sequence
MRCMRVALLF VFLLAGSVAA GAGEVVVEFT SDGPGGQSPY TIIKNALGTD SLEVPDNFHS 
PPVAHIQDQT LVAVGNCFLF ILHRDKDGDP TGTTKNQRNE IKVGKYAIDE AKGTPDNPLT
YEWLFKVGKD MKVSREFTHI FQLKSVGGDD SQPIITLTGA KVSGNDRLQL RYNQSSASKL
QILRSIPWSS ARNRWIKATI STTFKDDGYL KVRLSRLSDN YTILSYSNQN IDMWRGGTFV
RSKYGIYRSL NYKTELNDGR VFFANFRIIK