| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3165 |
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| Symbol | |
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| ID | 4458505 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 3882318 |
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| End bp | 3882974 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639703936 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_847273 |
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| Protein GI | 116750586 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.79763 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGACCTGC AGGTCATTGC ACGAAACCTG GAATTCATGG CCGGAGGTCT TGTGGTCACG
TTCGAGATCA CCGCCGTTGC CCTGGCCGGC GGCTTGCTCT GGGGCATTCT CCTCGGTCTG
GGCCGCCTGT CCCGGATACC CTGGATTTAC TATCCGGTGA CCGTGTACGT TCATTTTTTC
CGAAGCCAGC CCCTCATCCT GGTCATTTTC TGGTTCTATT TCCTGGTCCC CGTCATGACC
GGGAAACCCC TGGGCGCATT CGTATCGACT CTCATCGCCT TTGTTGCCTT CGAAGCGGCC
TATTTCGCCG AAATCGTCCG GGGTGGAGTG CAGTCCGTGT CCGGGGGGCA GGCCGCCGCC
GGGTATTCCT GCGGGCTCAG GTATCACCAG GTGCAGCTGT ACATCATTCT CCCCCAGGCC
CTGAGAAACA TGCTGCCGGC TCTCACCACG CAGGCCGTCG TAATCTTTCA GGATACCTCG
CTGGCTTATG TCATCGGGCT GCGGGAGTTT CTGCGCCGCG TGAACCTGGT CGACACGCGC
GAGGCCCGCT CCATTGAGCT CTACCTTTTT GCGGGAACGG TCTATCTCGT CCTCTGTTTC
CTCGGCTCCG CGGCGGCGCG CCGACTTGAA AGACGCAGGG AGGTCAGCCT GTCGTGA
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| Protein sequence | MDLQVIARNL EFMAGGLVVT FEITAVALAG GLLWGILLGL GRLSRIPWIY YPVTVYVHFF
RSQPLILVIF WFYFLVPVMT GKPLGAFVST LIAFVAFEAA YFAEIVRGGV QSVSGGQAAA
GYSCGLRYHQ VQLYIILPQA LRNMLPALTT QAVVIFQDTS LAYVIGLREF LRRVNLVDTR
EARSIELYLF AGTVYLVLCF LGSAAARRLE RRREVSLS
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